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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00052375 ID=TCONS_00052375|Name=TCONS_00052375|organism=Clytia hemisphaerica|type=transcript|length=1328bp tttagcttaaaaaggAAATGAAAACACATAAGGTAGCATatatgaaagat tatttttaaaattatgcTAAATTCGAATAAAACAATCAAGGACAATGGAA TCATATTTGGGAGATCATAAAGTAGCAATTGATTTCATCAAGTCATGTGG TagccatctttgtttatctgCGTCACCCATAGCAACGGGTTGTGTTTTGT ATCATCGCATCGTGCGCAAGCAGCTGGAATTGAAAGAACGGGATGTGGAC ATTGAAAAATATCTATTAGCGACAACCTGTTTGTATTTGGGAGCAAAAAT CGAAGAAGAACCCCAAAAAATTCGTGATGTCATCAACGTTGCACACAgat tactCCATCAAGACGAGAAAGCTTTGGAGATTGGAGACGATTATTGGAAA CTCCATGACAGCGTGACAGCTTGTGAACTGATAGTTTTGagatatttgaa atttcaagtaACTTTCGATTCACCAATCAAGTACATTTTAATGTTTTGTA AATCCTTGGAGGATTGGTTACCAGATTCGAACATTCTCCACCAATCAAAA CTTCCACAGATTTGTTGGAACATGGTGAACGACTTATGTTACTTACCGCT AGTTATCTTCTACCCTGCAGAAGTAGTAGCCGCAAGTATTGTATACATCG CACTGGAAGTAACACATTTGGAAATCCCCGAACATAAAGAAGGCAAACGA TGGTTTCAGGTCCTGTGTCCAGGGATTAAGGAGAACAAATTAAAAGACAT TGGATGTAAGATATTGACCTTGTATGATCATATCAAAGTGAAGTAAATCA GTTGTTTTGATGTTATTGGGCGTCGTGCTTGGATCAAGAGACATTCTGGT TACTCATTACATAGGTTTATACGGGGTTAACCTCCTTTCCACGCCATGTT TTGACCTGGGAAAGTAGATATTTGAAAGGTTTTTAAAAAGCTGTTGGGCA AAAGCTATTTATTTTGTTATGAGCCTGCCCAGCTATTACATGAAACACTG TTATGAATATCATCTAAGAGCCAATGTATGATTAGATCAACGTTGCTTGG AAGTTTTCCTCGCTGGAGAAAGTTTCATGGAGTCAAACATAAGACATGAT AATGATGATGAAGGAACAAAGACGAAGTATGATTAAATTTAGATGGTTAT TTTCTGTCCTCCACGTGAGAGCTCTAAAGGAAGGGTATGGGACTAACCAA GTTGTATATTTATGCATATTTAGACGAAAGAGTTCGATAGTAATTACCGC ATTCAGCTAACCGAGATATGTTCTATTTACACAGAATACTACATTATTCA GATGCAGATGAGACgtgctaaagctctg Run BLAST on NCBI protein sequence of TCONS_00052375-protein >TCONS_00052375-protein ID=TCONS_00052375-protein|Name=TCONS_00052375-protein|organism=Clytia hemisphaerica|type=polypeptide|length=233bp
MESYLGDHKVAIDFIKSCGSHLCLSASPIATGCVLYHRIVRKQLELKERD VDIEKYLLATTCLYLGAKIEEEPQKIRDVINVAHRLLHQDEKALEIGDDY WKLHDSVTACELIVLRYLKFQVTFDSPIKYILMFCKSLEDWLPDSNILHQ SKLPQICWNMVNDLCYLPLVIFYPAEVVAASIVYIALEVTHLEIPEHKEG KRWFQVLCPGIKENKLKDIGCKILTLYDHIKVK Run BLAST on NCBI transcript from alignment at scaffold_213:976291..989675- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00052375 ID=TCONS_00052375|Name=TCONS_00052375|organism=Clytia hemisphaerica|type=transcript|length=13385bp|location=Sequence derived from alignment at scaffold_213:976291..989675- (Clytia hemisphaerica) TTTAGCTTAAAAAGGAAATGAAAACACATAAGGTAGCATATATGAAAGAT
TATTTTTAAAATTATGCTAAATTCGAATAAAACAATCAAGGACAATGGAA
TCATATTTGGGAGATCATAAAGTAGCAATTGATTTCATCAAGTCATGTGG
TAGCCATCTTTGTTTATCTGCGTCACCCATAGCAACGGGTTGTGTTTTGT
ATCATCGCATCGTGCGCAAGCAGCTGGAATTGAAAGAACGGGATGTGGAC
ATTGAAAAATATGTAAGTAGTTGGTTATTTTCTTCTGTTTGTTTAACATT
CTTTCGCTTTAAATCTTTATTGATAAACTTATTTTGTTAAAAACTCCCAT
CGCGTTTCATCCTATTAATAGGTGAATTCCCGGTAGGGGTCACCAGTGGC
TGCCCGTAGCAGTGCCTATAGACCAAGAGTAAGGGAGCTGTCTATTGTGT
AGACTAGAAATTCATTGTTTTTTGTTGGGTCATCAAAGAACTACAGTACT
TGAGGTTTCCAAAGAGGGTTTTAGCCCAGACCAGATTCACTCACCACTAT
GTTTAAAGAAGGTACTATTTTGTCTTTTAGCTATTAGCGACAACCTGTTT
GTATTTGGGAGCAAAAATCGAAGAAGAACCCCAAAAAATTCGTGATGTCA
TCAACGTTGCACACAGGTTTTTATTTACTTAAAATTAAATTATGCCTTTG
GTAAATGAGTAAAACATTATTGATCGATAACATTATTTATACCTACAGGT
TTAAATTTCGCTAATTAAGATTTTAGAACTTTGAAAACCGTTTAGACCTA
CCTGGAGGTCCTGTAAATTAACCTTTGTCCTTTCGTCCGTTCGTCGGTCC
GTCTGTTACCAGCTTTTCTCGAGATTGGCTCATTAGTTTTTTTCTGATTC
TTGGCACAATGGGCTTTTCCAGAAAAAAACCGTATACCCCCTGTTGAGGA
GGTCCATCATTTTGTGGCTGGAAATGCTGTTACCCCCTGGAATTCCAGGA
AATTTCAGGTTTCAACCCCTCTGGAATTCTGAATTTTAGTAGGATTTAAA
AGGCTACCCCCATGGAATTCCAGTTATTTTTGACAGATTTTTGTATCTCC
CTATGAAATTCCGCCACATATCAAACCTTACCACCTTGGAACGGAAATGG
ACCTCCTCAACAGGGGGTATACGGTTTTTTTCTGGAAAAGCCCAATGAGT
GTAAAATAGTAATGGCCAAAATGTGATGGAGCCCGATTTTCAAGAAAAAA
CTTTAAATTTTCGTCCCCTAAGGTACCGTTTTAACATATTTTTTTAATCG
AAACAAAGACACGTGTACACTACGAAATATATTACAATACATTACTTAAA
CATAAATATAGCCACTCCCTCCGCTAGGAACTAATGTTATGTCGACAGAG
GTACTAGACTATGTAAAATAAATATATAAGAAACAAAAACAAAGATCTTG
GAGAAGGAGGCTAAAATTGTTAGGTAAAAACCTAAAATAAAACACTGCTG
AACCTTCCATTGTCTCGTTAAGAAATTCGACAACAGAACGAAGAATGGAT
TTATTTAGATTTGAGGTCAAACTTTCCTCCCCATATAATAAAAGCCGACA
GAAAAAAGAAGGGTTGAGTGGATGAAAAACAATGCCTAGGGTCTGAATTT
TGTCGAACAAAGGTTGTTTTGCATGGGAATATATGCAGTGCAGAAAAAAG
CGAGTTTTCAACAGAGTTAGTTCGGCAAACAAAGAAAGGGTCTAAAGTGT
CGCGAAAGCCATGCCTAAATTTATGCTCGTTGAGATGGCTGAAACCAACC
CGAAGTCGATTAAGAAAGATCACTCCTTGAATGTCAGGAACATCAAAAAC
ACGATATTGCTTTTGGCCTTCGTATCTTCTCATCTAGATGGCGATCAAAA
GAAAGTTTTGAGTCTAAGATTGATTAGACCAAGATGTTTCTTGCATCACT
GTACGCGATAATAAAGATTAGAGTCATTAAAGGAAATTACTGGAGCATTA
GCAGGAGTGAGTCTACAGGTAAAATAGACTTCAACAGCTTGCTTAGACAT
TTTTGTACATTTTTTAGACATTTATATTTTTTTTCAGATTACTCCATCAA
GACGAGAAAGCTTTGGAGATTGGAGACGATTATTGGAAACTCCATGACAG
CGTGACAGCTTGTGAACTGATAGTTTTGAGATATTTGAAATTTCAAGTAA
CTTTCGATTCACCAATCAAGGTATAGTTCATTCGTATTTTGATTTTAGAC
AACAAGTTACCTTATCTTTTATTAACTAAACCAACCTAGTATGGGGACCT
GTACTTTCGTAAGAAACCCTTTTTGGACTTACCTCGGAGGTCCTTTAAAT
TAACCCATGTCCGTCCGTCTGTTACCAGCTTTTCTCGGGATCGGCTCATT
ACTTTTTTCCGTTTTTTGACACAATGATACAAAATGATAATTCCTAAAAA
GTGACAGAGCCCGATTTTCGAAAAAAAAAAAATTCCGGCCAAAAATGCCG
ATAATATGCCGGAAAAACTGTTTTTTTGGCATTTTCTCGAGATTTTATCA
TTAGTTTTTTCTGATTTTTTGCTCAAAGATGCGTGTTAACAATGCCCAAA
GCATGGCTGTGTCCGATTTTTGAGAAAAAATTTTTCCGGCCGAAAATGCT
GGAAATATACCAGAAATCACCGTTTTGCAGATTTTCATTAGACTTTTACT
TAATAATTCTTTGTTTTTTTTCAAACTAAAACAACATTGATAACAATGCC
CCCCGGGGGGGGGGCAGCTGGGCAAAATGACCGACGGGTATGTGCGGGCC
CTAAGGGTACCTTTTCCAAGATGTTTAAAATGCACTGTAAGGGTCGGAAA
ANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNACGAAAAGGATTGAAAATTTGGGGGAAAATGCACTCTAAGGGTATGA
TTTTCATCGAATTTTGCTGCACTGTAAGGGTGCAATTTTAAAAGCCAATT
TTCAGCCCGCACATACCGTCAGTCCGCAAAGCCAGTGCCCCCCCGGGCAA
TGCCCACCATCAAGCATGATTCAATTGTCAATAAAACTGATTTTTGCAAC
CGGAACTCTTTCTATTTCTTTTTTCCCTACTCCCCTTCCCTCTCCCCCCA
TCAGCAATCAATGATGAAATTTCTTGCGTTATGCATTTTCGCGAAACGCT
ATGTTTTCTTCATTTTTCTCTTTATTGCTATCCAATTTTCATCATCAGGT
AGGTCCATTCAGCATTTGGCTTGTTTGTTATAAAATTGTAAATCGGAACG
TGTCAATAATTACATAGTAAATCAGACACGTGTTTCGTCCTTCACAAGAC
TTACCTGTGCGGCTTTTTTATGAACCAGTGGCATTGCAGGGGAGAGAGTG
GTGGAAACCTTTTGTTCACTATAGGGAAAAAAATTGGAAATTTTCCTTTT
AGTTTGCCTCGATTTTGGTCAGCCTACCACCATCTATTAAGAACGTATAC
AGAAAAAGTGTTTCCGTTAATTCGTTTTTCAGTGTGAATTAGTACTAAGT
TTTAAATCTTTTTTTCATCCATTCAGTACATTTTAATGTTTTGTAAATCC
TTGGAGGATTGGTTACCAGATTCGAACATTCTCCACCAATCAAAACTTCC
ACAGATTTGTTGGAACATGGTGAACGACTTATGTTACTTACCGCTAGTTA
TCTTCTACCCTGCAGAAGTAGTAGCCGCAAGTATTGTATACATCGCACTG
GAAGTAACACATTTGGAAATCCCCGAACATAAAGAAGGCAAACGATGGTT
TCAGGTTTGTCAAAAGGCTTTCAAAATTGTTCAATAAAGTCTCAATATAA
TCTACTAATCCTAAAAGCTCTAAATTTTCATTGAATTTGTCAAAAGGCTA
TCAAAATTGTTCAATAAAGTCTCAATATAATCTACTAATCCTAAAAGCTC
TAAATTTTCATTGAATTTGTCAAAAGGCTATCAAAATTGTTCAATAAAGT
CTCAATATAATCTACTAATCCTAAAAGCTCTAAATTTTCATTGAATTTGT
CAAAAGGCTATCAAAATTGTTCAATAAAGTCTCTATATAATGTACAGCGG
AGACAAAAAGCTCTAAATTTTCATTGAATTTGAGCAGATTTGCGCTGGTT
GAAAAGATATTCAAAAGTGCAATATTACCAAATGAGAAAATCAAAAAAAT
CTGGAAAATCAAAATCAAAATAAAGAAAAAGAAAAAAAATCAACTTCGTG
AAGTTATTTCTTAAGACGATTTTTTTCTAGCGTTGTGTTATTTCCATACT
TTACAAACGCAAGTCCTACCCGCAGACGAGGTTCAAAACGTCTGAACTAT
ATTTCTTAAATCAATTAATTACGTGATTATTTATGATGTAATACTCGATT
TCTTTGGTGTAGCAAGTTAAAATTTGTCTCGATGGTTGATTAACTTTTTA
GAATTGTTTTTTGGCCTGAGATACATAACTTCTCTTCCTATACCTTTATT
TTTCAGGTCCTGTGTCCAGGGATTAAGGAGAACAAATTAAAAGACATTGG
ATGTAAGATATTGACCTTGTATGATCATATCAAAGTGAAGTAAATCAGTT
GTTTTGATGTTATTGGGCGTCGTGCTTGGATCAAGAGACATTCTGGTTAC
TCATTACATAGGTTTATACGGGGTTAACCTCCTTTCCACGCCATGTTTTG
ACCTGGGAAAGTAGATATTTGAAAGGTTTTTAAAAAGCTGTTGGGCAAAA
GCTATTTATTTTGTTATGAGCCTGCCCAGCTATTACATGAAACACTGTTA
TGAATATCATCTAAGAGCCAATGTATGATTAGATCAACGTTGCTTGGAAG
TTTTCCTCGCTGGAGAAAGTTTCATGGAGTCAAACATAAGACATGATAAT
GATGATGAAGGAACAAAGACGAAGTATGATTAAATTTAGATGGTTATTTT
CTGTCCTCCACGTGAGAGCTCTAAAGGAAGGGTATGGGACTAACCAAGTT
GTATATTTATGCATATTTAGACGAAAGAGTTCGATAGTAATTACCGCATT
CAGCTAACCGAGATATGTTCTATTTACACAGAATACTACATTATTCAGGT
AGTATGTTCGTTTTTCAAATGTATCCAACGTTCATTTTTAACATCCTTTT
AACGTTAATATAATGCTCGCGACGGCGGACAATGTTGTGTTCTAGATTGG
AGGTTCATTGGGAGGTTTGTACATGTTCCTACCCCCGGAAATTAGTCACA
GGAAAATTCACAAAATTTAGGAATTTTTTTTTATTTAGAGTGAAAAAATT
GTAAAAAAGTCTCTCTAAGGGTAGGGAATTTTTCAAAAAAGACTCTCTAA
GTCACCTTTTCAGCAATATTTCTTAAATCAATTAATTACGTGATTATTTA
TGATGTAATACTCGATTTCTTTTCTTTTCAACTCTCTTTAAGAGTTGTTT
TATGGAGGTCCCATCCGCACTGCCAGCCCTGTGAATCCAGGTCGGCATTC
GGCAATGCCGACCTGAAAGCCGACGTAACTTGAGCTGAAGTCGGCTTTTA
TTTGCCGACGTAATTTACACTCTAGNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NCGGCAAAGCCGACCTAAAGAGGAAAAATATTATTTGTTAGGTTAATCTA
ATTGTGTTATCATTTGATAACACATGATAATCGAGCCTCATTCCATTCTC
TTTGTAAAACATAAAACTTATTAACACAATTATTAATGATAGTTAAACTA
ACTGTAGGAAATTTATTGTCTTTGCCGACCTAAACAAGCTACTTAGGACG
GCTTTGCCGACCTAAAATAACCTCTAGGTCGGCAAAATTTTGCCGGCCTA
CGGCCGGTTTTGTTCGGCACTTACATGCCGATATGATTTTTTCTGAATTC
ACAGGGCTGCGCACACATAACCCTAGACGATCCTATCGTCTACACAAGAT
CACTAAATAGTTTAGGAGAGGCGTGATAAATTCGGGTGGAGTAAGCAGTG
GCGGAGATGTTTACAGTGTAGACGATACCAATTTGGCGCAAAAGCAAAAA
AACTGAAATAAGCCGTGGATTTGCCTTTGCGTATTATTGATGATTCGGTT
CGGTCATTTTCAAAACATTCGAAAACGCACAGCATCAACTTTTACTTTTC
TACACTGGCTGAAGGATTTTTTTGCATGAAATTCTTTTCTTTATGGGTTT
ATTTTGTAGCTCAAATTGAGAATGTTAGTTTGCAATTTGTTTGCAACAAG
TATTTAAATTTTAAGAGCCATGCTTCATATGTTTAACATACTTTTTGACT
TCAGAAACACAAAGACTAACAGGTTTGTTGTTAATATTTTTTTACTTCCA
ACCTTCTACAGTAATTTAACTCAAAGACACCACACTTGCTGTACATTTAG
TATCATTTTACACATTTCCCTTCTGATAAAAACAGCTTTTTACCTTCTTT
TCAATACTCCCTATTTTTGTTTTGTTAGAAATTCTACAAGTTACTTATTT
TTAACTTTTATATTTTTTATATTTGACATGTTCAGTAGTATAGAAGTATA
ATTATAGCCACAGGAAATCATTTTGAAATTTTTAATTTTTGTTTGTCTAG
AAGATGGTATCAATTTGAAGGTAGACTATGTGCTTCTGGCAGCTAGAGAA
GAGTTTTATTCTGATACAAAAAATCATTACAGGATAGTTTGACAATTGAN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNTTCTTCCTTCAGGAATTATGGATTGAATGAAGATTG
TGGTGTGGATCAAAAGATTCTTGCCAGAGCGGTACGCTCAAACACATCCA
AAAGTATCCAAAAGTAAGTCAAAAAATTATATATATGAAATATTTTAATT
CCCGCAACCCAAAGATTATGCTAAAAAATTTTATCGCTGAATGTCTTAAC
CTGTAGTAGAATAGTAAAGGAATAACAATTACTTGAGAATGTGTAAGTAC
AATTTTTACATTATACCCTAACCACAACAAGTAGAAAACAACAAATTAGT
CACTTATATAGAAAAAATTCTCAAAAATTAATTCAATGTACGGGTAGCAA
CATGAGTATTCACAGCTTGCATTTGGCAGTACCATTTTTGATTGTTCTGA
CTGGTTTTATTCTTCATTCAACGTACAGAACAATTTTCCAACCACGTTCT
ACTGGTTCAATTTCACAAATTTCACAAATTACATAAAATAACACGAAATA
ATTTTATAAAAAGGTATATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAATTTCAAGG
AATGGAAAGAATGGAAAACATACCTTGCCTGATTAAAATGGAATCTTGAG
GGGAAAGTCAGTCAGGTTGTTGTTCATATTCAAAAAGATTTTTTCCAAAA
GCAAATCTTGAGGAATCTAATCCCTACTGACACACTAAAGACTTATATAC
TGTACACAAAAACTCATGCATAAAAAAGACTAATAAAAGTAGAAATAATT
GTTCTCCACCATGAAAATAAATCTCATAAAAACAATCTGAGTGAAATTTC
ATCAGCCATCTTTCTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNTTGGTATCGTCCGTTTTGTTCCAAAACTCTACCG
CCACTTTTTTCCCGTAAACCGCCCTGACGCCCTAACTGTTTCTCGCATTT
ACTTTAAACGGACGATAGCATCGTCTAACATAACCCTCGTCTGCCAACCC
TCGTACCCCCTGGCTCCTACCACAGCTAATAATTGATATTACTTTATCTG
TCACCCAGATGCAGATGAGACGTGCTAAAGCTCTG Coding sequence (CDS) from alignment at scaffold_213:976291..989675- >TCONS_00052375 ID=TCONS_00052375|Name=TCONS_00052375|organism=Clytia hemisphaerica|type=CDS|length=3510bp|location=Sequence derived from alignment at scaffold_213:976291..989675- (Clytia hemisphaerica) GTCCTGTGTCCAGGGATTAAGGAGAACAAATTAAAAGACATTGGATGTAA GATATTGACCTTGTATGATCATATCAAAGTGAAGTAATACATTTTAATGT TTTGTAAATCCTTGGAGGATTGGTTACCAGATTCGAACATTCTCCACCAA TCAAAACTTCCACAGATTTGTTGGAACATGGTGAACGACTTATGTTACTT ACCGCTAGTTATCTTCTACCCTGCAGAAGTAGTAGCCGCAAGTATTGTAT ACATCGCACTGGAAGTAACACATTTGGAAATCCCCGAACATAAAGAAGGC AAACGATGGTTTCAGATTACTCCATCAAGACGAGAAAGCTTTGGAGATTG GAGACGATTATTGGAAACTCCATGACAGCGTGACAGCTTGTGAACTGATA GTTTTGAGATATTTGAAATTTCAAGTAACTTTCGATTCACCAATCAAGCT ATTAGCGACAACCTGTTTGTATTTGGGAGCAAAAATCGAAGAAGAACCCC AAAAAATTCGTGATGTCATCAACGTTGCACACAGATGGAATCATATTTGG GAGATCATAAAGTAGCAATTGATTTCATCAAGTCATGTGGTAGCCATCTT TGTTTATCTGCGTCACCCATAGCAACGGGTTGTGTTTTGTATCATCGCAT CGTGCGCAAGCAGCTGGAATTGAAAGAACGGGATGTGGACATTGAAAAAT ATGTCCTGTGTCCAGGGATTAAGGAGAACAAATTAAAAGACATTGGATGT AAGATATTGACCTTGTATGATCATATCAAAGTGAAGTAATACATTTTAAT GTTTTGTAAATCCTTGGAGGATTGGTTACCAGATTCGAACATTCTCCACC AATCAAAACTTCCACAGATTTGTTGGAACATGGTGAACGACTTATGTTAC TTACCGCTAGTTATCTTCTACCCTGCAGAAGTAGTAGCCGCAAGTATTGT ATACATCGCACTGGAAGTAACACATTTGGAAATCCCCGAACATAAAGAAG GCAAACGATGGTTTCAGATTACTCCATCAAGACGAGAAAGCTTTGGAGAT TGGAGACGATTATTGGAAACTCCATGACAGCGTGACAGCTTGTGAACTGA TAGTTTTGAGATATTTGAAATTTCAAGTAACTTTCGATTCACCAATCAAG CTATTAGCGACAACCTGTTTGTATTTGGGAGCAAAAATCGAAGAAGAACC CCAAAAAATTCGTGATGTCATCAACGTTGCACACAGATGGAATCATATTT GGGAGATCATAAAGTAGCAATTGATTTCATCAAGTCATGTGGTAGCCATC TTTGTTTATCTGCGTCACCCATAGCAACGGGTTGTGTTTTGTATCATCGC ATCGTGCGCAAGCAGCTGGAATTGAAAGAACGGGATGTGGACATTGAAAA ATATGTCCTGTGTCCAGGGATTAAGGAGAACAAATTAAAAGACATTGGAT GTAAGATATTGACCTTGTATGATCATATCAAAGTGAAGTAATACATTTTA ATGTTTTGTAAATCCTTGGAGGATTGGTTACCAGATTCGAACATTCTCCA CCAATCAAAACTTCCACAGATTTGTTGGAACATGGTGAACGACTTATGTT ACTTACCGCTAGTTATCTTCTACCCTGCAGAAGTAGTAGCCGCAAGTATT GTATACATCGCACTGGAAGTAACACATTTGGAAATCCCCGAACATAAAGA AGGCAAACGATGGTTTCAGATTACTCCATCAAGACGAGAAAGCTTTGGAG ATTGGAGACGATTATTGGAAACTCCATGACAGCGTGACAGCTTGTGAACT GATAGTTTTGAGATATTTGAAATTTCAAGTAACTTTCGATTCACCAATCA AGCTATTAGCGACAACCTGTTTGTATTTGGGAGCAAAAATCGAAGAAGAA CCCCAAAAAATTCGTGATGTCATCAACGTTGCACACAGATGGAATCATAT TTGGGAGATCATAAAGTAGCAATTGATTTCATCAAGTCATGTGGTAGCCA TCTTTGTTTATCTGCGTCACCCATAGCAACGGGTTGTGTTTTGTATCATC GCATCGTGCGCAAGCAGCTGGAATTGAAAGAACGGGATGTGGACATTGAA AAATATGTCCTGTGTCCAGGGATTAAGGAGAACAAATTAAAAGACATTGG ATGTAAGATATTGACCTTGTATGATCATATCAAAGTGAAGTAATACATTT TAATGTTTTGTAAATCCTTGGAGGATTGGTTACCAGATTCGAACATTCTC CACCAATCAAAACTTCCACAGATTTGTTGGAACATGGTGAACGACTTATG TTACTTACCGCTAGTTATCTTCTACCCTGCAGAAGTAGTAGCCGCAAGTA TTGTATACATCGCACTGGAAGTAACACATTTGGAAATCCCCGAACATAAA GAAGGCAAACGATGGTTTCAGATTACTCCATCAAGACGAGAAAGCTTTGG AGATTGGAGACGATTATTGGAAACTCCATGACAGCGTGACAGCTTGTGAA CTGATAGTTTTGAGATATTTGAAATTTCAAGTAACTTTCGATTCACCAAT CAAGCTATTAGCGACAACCTGTTTGTATTTGGGAGCAAAAATCGAAGAAG AACCCCAAAAAATTCGTGATGTCATCAACGTTGCACACAGATGGAATCAT ATTTGGGAGATCATAAAGTAGCAATTGATTTCATCAAGTCATGTGGTAGC CATCTTTGTTTATCTGCGTCACCCATAGCAACGGGTTGTGTTTTGTATCA TCGCATCGTGCGCAAGCAGCTGGAATTGAAAGAACGGGATGTGGACATTG AAAAATATGTCCTGTGTCCAGGGATTAAGGAGAACAAATTAAAAGACATT GGATGTAAGATATTGACCTTGTATGATCATATCAAAGTGAAGTAATACAT TTTAATGTTTTGTAAATCCTTGGAGGATTGGTTACCAGATTCGAACATTC TCCACCAATCAAAACTTCCACAGATTTGTTGGAACATGGTGAACGACTTA TGTTACTTACCGCTAGTTATCTTCTACCCTGCAGAAGTAGTAGCCGCAAG TATTGTATACATCGCACTGGAAGTAACACATTTGGAAATCCCCGAACATA AAGAAGGCAAACGATGGTTTCAGATTACTCCATCAAGACGAGAAAGCTTT GGAGATTGGAGACGATTATTGGAAACTCCATGACAGCGTGACAGCTTGTG AACTGATAGTTTTGAGATATTTGAAATTTCAAGTAACTTTCGATTCACCA ATCAAGCTATTAGCGACAACCTGTTTGTATTTGGGAGCAAAAATCGAAGA AGAACCCCAAAAAATTCGTGATGTCATCAACGTTGCACACAGATGGAATC ATATTTGGGAGATCATAAAGTAGCAATTGATTTCATCAAGTCATGTGGTA GCCATCTTTGTTTATCTGCGTCACCCATAGCAACGGGTTGTGTTTTGTAT CATCGCATCGTGCGCAAGCAGCTGGAATTGAAAGAACGGGATGTGGACAT TGAAAAATAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00052375-exon-scaffold_213-1575043694:989414..989675 | TCONS_00052375-exon-scaffold_213-1575043694:989414..989675 | Clytia hemisphaerica | exon |
TCONS_00052375-exon-scaffold_213-1575043694:989010..989095 | TCONS_00052375-exon-scaffold_213-1575043694:989010..989095 | Clytia hemisphaerica | exon |
TCONS_00052375-exon-scaffold_213-1575043694:987456..987588 | TCONS_00052375-exon-scaffold_213-1575043694:987456..987588 | Clytia hemisphaerica | exon |
TCONS_00052375-exon-scaffold_213-1575043694:985672..985899 | TCONS_00052375-exon-scaffold_213-1575043694:985672..985899 | Clytia hemisphaerica | exon |
TCONS_00052375-exon-scaffold_213-1575043694:984378..984969 | TCONS_00052375-exon-scaffold_213-1575043694:984378..984969 | Clytia hemisphaerica | exon |
TCONS_00052375-exon-scaffold_213-1575043694:976291..976317 | TCONS_00052375-exon-scaffold_213-1575043694:976291..976317 | Clytia hemisphaerica | exon |
TCONS_00052375-exon-scaffold_213-1510915933:989414..989675 | TCONS_00052375-exon-scaffold_213-1510915933:989414..989675 | Clytia hemisphaerica | exon |
TCONS_00052375-exon-scaffold_213-1510915933:989010..989095 | TCONS_00052375-exon-scaffold_213-1510915933:989010..989095 | Clytia hemisphaerica | exon |
TCONS_00052375-exon-scaffold_213-1510915933:987456..987588 | TCONS_00052375-exon-scaffold_213-1510915933:987456..987588 | Clytia hemisphaerica | exon |
TCONS_00052375-exon-scaffold_213-1510915933:985672..985899 | TCONS_00052375-exon-scaffold_213-1510915933:985672..985899 | Clytia hemisphaerica | exon |
TCONS_00052375-exon-scaffold_213-1510915933:984378..984969 | TCONS_00052375-exon-scaffold_213-1510915933:984378..984969 | Clytia hemisphaerica | exon |
TCONS_00052375-exon-scaffold_213-1510915933:976291..976317 | TCONS_00052375-exon-scaffold_213-1510915933:976291..976317 | Clytia hemisphaerica | exon |
TCONS_00052375-exon-scaffold_213-1491911889:989414..989675 | TCONS_00052375-exon-scaffold_213-1491911889:989414..989675 | Clytia hemisphaerica | exon |
TCONS_00052375-exon-scaffold_213-1491911889:989010..989095 | TCONS_00052375-exon-scaffold_213-1491911889:989010..989095 | Clytia hemisphaerica | exon |
TCONS_00052375-exon-scaffold_213-1491911889:987456..987588 | TCONS_00052375-exon-scaffold_213-1491911889:987456..987588 | Clytia hemisphaerica | exon |
TCONS_00052375-exon-scaffold_213-1491911889:985672..985899 | TCONS_00052375-exon-scaffold_213-1491911889:985672..985899 | Clytia hemisphaerica | exon |
TCONS_00052375-exon-scaffold_213-1491911889:984378..984969 | TCONS_00052375-exon-scaffold_213-1491911889:984378..984969 | Clytia hemisphaerica | exon |
TCONS_00052375-exon-scaffold_213-1491911889:976291..976317 | TCONS_00052375-exon-scaffold_213-1491911889:976291..976317 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_213 | supercontig | scaffold_213:976291..989675 - |
Annotated Terms
The following terms have been associated with this transcript:
Blast
BLAST of TCONS_00052375 vs. Swiss-Prot (Human)
Match: FA58A (Cyclin-related protein FAM58A OS=Homo sapiens GN=FAM58A PE=1 SV=2) HSP 1 Score: 132.109 bits (331), Expect = 3.970e-35 Identity = 68/216 (31.48%), Postives = 127/216 (58.80%), Query Frame = 2
Query: 134 FIKSCGSHLCLSASPIATGCVLYHRIVRKQLELKERDVDI-EKYLLATTCLYLGAKIEEEPQKIRDVINVAHRLLHQDEKALEIGDDYWKLHDSVTACELIVLRYLKFQVTFDSPIKYILMFCKSLEDWLPDSNILHQSKLPQICWNMVNDLCYLPLVIFYPAEVVAASIVYIALEVTHLEIPEHKEGKR-WFQVLCPGIKENKLKDIGCKILTLY 775
FI G L + + PIAT C +YH+ E ++D + YL+A + +YL K+EE+ + RD+INV++R + + LE+ +W+L DS+ CEL++LR L+FQV+F P KY+L + SL++WL + + ++ + W ++ D + L + + A+ +A +++Y+AL+V +E+P E ++ W+QV + + + +I ++ +Y
Sbjct: 33 FIMEAGVKLGMRSIPIATACTIYHKF------FCETNLDAYDPYLIAMSSIYLAGKVEEQHLRTRDIINVSNRYFNPSGEPLELDSRFWELRDSIVQCELLMLRVLRFQVSFQHPHKYLLHYLVSLQNWL-NRHSWQRTPVAVTAWALLRDSYHGALCLRFQAQHIAVAVLYLALQVYGVEVPAEVEAEKPWWQVFNDDLTKPIIDNIVSDLIQIY 241
The following BLAST results are available for this feature:
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