TCONS_00052422-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00052422-protein
Unique NameTCONS_00052422-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length374

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00052422-protein ID=TCONS_00052422-protein|Name=TCONS_00052422-protein|organism=Clytia hemisphaerica|type=polypeptide|length=374bp
SCHAGKENIFGKISLKIHSISDNQSYGWYCQKCKQNYFQPKNNSTLHNTC
TPCPKFTLSTRNRDSCYDPYSDKFIQFYNQNGLKLAMGLSIIGFIFCFFT
LLVFVRFRKTPVVRGSNFPITVMHIICMICLFTTMLLPFMVSKTSTSTCL
VELLIISLLVFCPHTLILIKCQNLLLAFHSKVRLSKRTKRRMLGSQISLV
TLLIFIDMGFLLLSLHSKPIKLTVDTDNSKYMRSYRCDTQVHTTIQIGFI
IILYLMTTIQAYRGRDLPGPFNEAMPIVYSSFTCIVTYITYFPFVYLQKD
KDIKIVARVLILIVSNLLFVMIFYSSKLYIILFVPKKNTANYLQQEMLKI
SKDRVDAKLKSHFASTEAYNHYQD
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_033147XLOC_033147Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00052422TCONS_00052422Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR017978GPCR_3_C
Vocabulary: Molecular Function
TermDefinition
GO:0004930G-protein coupled receptor activity
Vocabulary: Biological Process
TermDefinition
GO:0007186G-protein coupled receptor signaling pathway
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007186 G-protein coupled receptor signaling pathway
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0004930 G-protein coupled receptor activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR017978GPCR family 3, C-terminalPFAMPF000037tm_3coord: 95..330
e-value: 9.4E-21
score: 74.6
IPR017978GPCR family 3, C-terminalPROSITEPS50259G_PROTEIN_RECEP_F3_4coord: 89..347
score: 23.081

Blast
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BLAST of TCONS_00052422-protein vs. Swiss-Prot (Human)
Match: GRM7 (Metabotropic glutamate receptor 7 OS=Homo sapiens GN=GRM7 PE=1 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 4.265e-19
Identity = 80/360 (22.22%), Postives = 153/360 (42.50%), Query Frame = 0 
Query:   28 WYCQKCKQNYFQPKNNSTLHNTCTPCPKFTLSTRNRDSCYDPYSDKFIQFYNQNGLKLAMGLSIIGFIFCFFTLLVFVRFRKTPVVRGSNFPIT-VMHIICMICLFTTMLLPFMVSKTSTSTCLVELLIISLLVFCPHTLILIKCQNLLLAFHSKVRLSKRTKRRMLGSQISLVTLLIFIDMGFLLLSLHSKPIKLTVDTDNSKYMRSY------RCD-TQVHTTIQIGFIIILYLMTTIQAYRGRDLPGPFNEAMPIVYSSFTCIVTYITYFPFVYLQKDKDIKIVARVLILIVS-NL---LFVMIFYSSKLYIILFVPKKN------------TANYLQQEMLKISKDRVDAKLKSHF 363
            W C+ C    +Q         TC  CP       NR  C D    K +++++   + + + L+++G I   F +  F+R+  TP+VR S   ++ V+     +C   T L   M++K   + C    + + L +   +  +L K   +   F    +     +     SQ+++ + LI + +  + +     P  + +D D  K M         +CD T +     +G+ I+L +  T+ A + R +P  FNEA PI ++ +T  + ++ + P  +       K+  +   L +S NL   + + + Y  K+YII+F P+ N            TA  +   +     DR + + K+  
Sbjct:  543 WTCEPCDGYQYQFD-----EMTCQHCPYDQRPNENRTGCQDIPIIK-LEWHSPWAV-IPVFLAMLGIIATIFVMATFIRYNDTPIVRASGRELSYVLLTGIFLCYIITFL---MIAKPDVAVCSFRRVFLGLGMCISYAALLTKTNRIYRIFEQGKKSVTAPRLISPTSQLAITSSLISVQLLGVFIWFGVDPPNIIIDYDEHKTMNPEQARGVLKCDITDLQIICSLGYSILLMVTCTVYAIKTRGVPENFNEAKPIGFTMYTTCIVWLAFIPIFFGTAQSAEKLYIQTTTLTISMNLSASVALGMLYMPKVYIIIFHPELNVQKRKRSFKAVVTAATMSSRLSHKPSDRPNGEAKTEL 892
The following BLAST results are available for this feature:
BLAST of TCONS_00052422-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GRM74.265e-1922.22Metabotropic glutamate receptor 7 OS=Homo sapiens ... [more]
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