TCONS_00052490-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00052490-protein
Unique Name	TCONS_00052490-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	354

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00052490-protein ID=TCONS_00052490-protein|Name=TCONS_00052490-protein|organism=Clytia hemisphaerica|type=polypeptide|length=354bp
MSCFTCTSKFSWRKREHGCPNCGKAFCKDCLNYTASVKRLGGKQTNVCVD
CHKKLNVKTVQQKPGQASASTTGYSQANVSSDDPNVYLGPSMKDVADKKS
KQQKKHGLSKDISENDKDAAIKERLEKLKEKKEHSKPVTDSDLHQRFNNL
AGRQAASSSANKGNILQPQPRLTEEEQMLQLMKETQDEVKLDDRFDESQV
GTREKLSKDIQNMEDRFYKLKDQDPDEVRKEKERLKEEQYNDSSEDEDEA
MKKILRKALAESLLDDKVREAGHGDVIAKAKISSNKPTTSLGGAPVEEDD
DELPWCCICNNDATIRCHDCDNDLYCKRCFREGHDDFDMKNHRKSTYQKP
KKKQ

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_033189	XLOC_033189	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00052490	TCONS_00052490	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000306	Znf_FYVE
IPR013083	Znf_RING/FYVE/PHD
IPR017455	Znf_FYVE-rel
IPR011011	Znf_FYVE_PHD

Vocabulary: **Molecular Function**
Term	Definition
GO:0046872	metal ion binding

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 203..223
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 221..249
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 60..118
None	No IPR available	CDD	cd15749	FYVE_ZFY19	coord: 2..52 e-value: 1.84287E-17 score: 74.0792
None	No IPR available	SUPERFAMILY	57845	B-box zinc-binding domain	coord: 303..352
IPR000306	FYVE zinc finger	SMART	SM00064	fyve_4	coord: 1..57 e-value: 3.6E-4 score: 24.5
IPR000306	FYVE zinc finger	PFAM	PF01363	FYVE	coord: 2..55 e-value: 8.1E-9 score: 35.4
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10		coord: 1..68 e-value: 1.6E-13 score: 49.9
IPR017455	Zinc finger, FYVE-related	PROSITE	PS50178	ZF_FYVE	coord: 1..56 score: 10.32
IPR011011	Zinc finger, FYVE/PHD-type	SUPERFAMILY	57903	FYVE/PHD zinc finger	coord: 2..56

Blast

[Close]

BLAST of TCONS_00052490-protein vs. Swiss-Prot (Human)
Match: ANCHR (Abscission/NoCut checkpoint regulator OS=Homo sapiens GN=ZFYVE19 PE=1 SV=3)

HSP 1 Score: 160.229 bits (404), Expect = 5.899e-45
Identity = 124/429 (28.90%), Postives = 188/429 (43.82%), Query Frame = 0

Query:    3 CFTCTSKFSWRKREHGCPNCGKAFCKDCLNYTASVKRLGGKQTNVCVDCHKKLNVKTVQQKPGQASASTTGYSQANVSS-DDPNVYLGPSMKDVADKKSKQQKKHGLSKDISENDK--------------------DAAIKERLEKLKEKKEHSKPVTDSDLHQRFNNLAGRQAASSSANKGNILQPQP------RLTEEEQMLQLMKETQDEVKLDDRF---------------------------------------DESQVGTREKLSKD--IQNMEDRFYKLKDQDPDEVRKEKERLKEEQYNDSSEDEDEAMKKILRKALAESLLDDKVREAGHGDVIAKAKISSNKPTTSLGGAPVEEDD---------DELPWCCICNNDATIRCHDCDNDLYCKRCFREGHDDFDMKNHRKSTYQKPKKKQ 354
            C+ C  KF+  K+E+GC NCG+AFC  CL+++A+V R G  Q  VC  CH+ L                T  S AN S    P  Y     K VA  ++KQ+     S+ ++  D+                     A I+ RL  LK++++ S P T  ++  R   L GR   S +        PQP        T+ +Q   L+ +   EV +D+ +                                        E+ +  RE+ ++   I  +  R   L+ QDP+ V  +  RL +   ++  E    A++++L++   E+ LD    EA   ++ A+    +++P T   GA  E  D         +ELPWCCICN DAT+RC  CD DL+C RCFREGHD F++K H+ S Y  P+  Q
Sbjct:   80 CYGCAVKFTLFKKEYGCKNCGRAFCSGCLSFSAAVPRTGNTQQKVCKQCHEVL----------------TRGSSANASKWSPPQNY----KKRVAALEAKQKPSTSQSQGLTRQDQMIAERLARLRQENKPKLVPSQAEIEARLAALKDERQGSIPSTQ-EMEARLAALQGRVLPSQT--------PQPAHHTPDTRTQAQQTQDLLTQLAAEVAIDESWKGGGPAASLQNDLNQGGPGSTNSKRQANWSLEEEKSRLLAEAALELREENTRQERILALAKRLAMLRGQDPERVTLQDYRLPDSDDDEDEET---AIQRVLQQLTEEASLD----EASGFNIPAE---QASRPWTQPRGAEPEAQDVDPRPEAEEEELPWCCICNEDATLRCAGCDGDLFCARCFREGHDAFELKEHQTSAYSPPRAGQ 469

The following BLAST results are available for this feature:

BLAST of TCONS_00052490-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00052490-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
ANCHR	5.899e-45	28.90	Abscission/NoCut checkpoint regulator OS=Homo sapi...	[more]

You are here

TCONS_00052490-protein (polypeptide) - C. hemisphaerica