TCONS_00052507-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00052507-protein
Unique NameTCONS_00052507-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length241

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00052507-protein ID=TCONS_00052507-protein|Name=TCONS_00052507-protein|organism=Clytia hemisphaerica|type=polypeptide|length=241bp
MSDNDNERPRSNSGERGSDRGGRGDDNEELATRTLRIQSKRYYVDVKQNN
RGRFIKLVEGLPNGSKNRISFPMAIVGEVHDKLASFQEFYDKIDPDTERD
PPEDGRLKSDDIRAAQRKIYFDLKENKRGVFLRISSTASYGASRQTIALP
GEGIAQIKECLSDFLEEFGQDEQSSIDLPEFKEMRIERKRFYFDCGSNDR
GAFLRISEVTSRYRSSITVPRQGLEKFTGIINDIMGQMDAK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_033203XLOC_033203Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00052507TCONS_00052507Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006628PUR-bd_fam
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006628Purine-rich element binding protein familySMARTSM00712purcoord: 178..239
e-value: 1.2E-17
score: 74.6
coord: 29..91
e-value: 4.7E-16
score: 69.3
coord: 106..169
e-value: 2.1E-15
score: 67.2
IPR006628Purine-rich element binding protein familyPFAMPF04845PurAcoord: 28..238
e-value: 1.2E-68
score: 230.6
NoneNo IPR availableGENE3D1.10.238.10coord: 79..184
e-value: 9.2E-5
score: 22.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..32

Blast
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BLAST of TCONS_00052507-protein vs. Swiss-Prot (Human)
Match: PURA (Transcriptional activator protein Pur-alpha OS=Homo sapiens GN=PURA PE=1 SV=2)

HSP 1 Score: 160.229 bits (404), Expect = 8.221e-48
Identity = 86/215 (40.00%), Postives = 133/215 (61.86%), Query Frame = 0 
Query:   26 DNEELATRTLRIQSKRYYVDVKQNNRGRFIKLVEGLPNGSKNRISFPMAIVGEVHDKLASFQEFYDKIDPDTERDPPEDGR--------LKSDDIRAAQRKIYFDLKENKRGVFLRISSTASYG-----ASRQTIALPGEGIAQIKECLSDFLEEFGQDEQSSIDLPEFKEMRIERKRFYFDCGSNDRGAFLRISEVTSRYRSSITVPRQGLEKF 227
            + +ELA++ + IQ+KR+Y+DVKQN +GRF+K+ E    G+K+R++  M++  E  D L  F E Y ++ P     PP+  +        LKS+ +    RK Y DLKEN+RG FLRI  T + G        QTIALP +G+ + ++ L+  ++++G +E+ + +LPE   + ++ KRF+FD GSN  G F+R+SEV   YR+SITVP +   KF
Sbjct:   57 ETQELASKRVDIQNKRFYLDVKQNAKGRFLKIAEVGAGGNKSRLTLSMSVAVEFRDYLGDFIEHYAQLGPS---QPPDLAQAQDEPRRALKSEFLVRENRKYYMDLKENQRGRFLRIRQTVNRGPGLGSTQGQTIALPAQGLIEFRDALAKLIDDYGVEEEPA-ELPEGTSLTVDNKRFFFDVGSNKYGVFMRVSEVKPTYRNSITVPYKVWAKF 267
The following BLAST results are available for this feature:
BLAST of TCONS_00052507-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PURA8.221e-4840.00Transcriptional activator protein Pur-alpha OS=Hom... [more]
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