TCONS_00052509-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00052509-protein
Unique NameTCONS_00052509-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length340

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00052509-protein ID=TCONS_00052509-protein|Name=TCONS_00052509-protein|organism=Clytia hemisphaerica|type=polypeptide|length=340bp
MLNSKVITLMVFPTCVTYGMSIKDSHRPDEFSPSTTSDGAAGHWEPFWLG
DTPVDVIKSYAKETFAYVMENIKNNPDSPDIGFFTCHGFLLSKDETFKKP
FWYDIPSDSRVLSKDDLKMFPSEARSGMSFTTVYTEGRRLVPYYIKRFQE
MGGKVFQKLISSLDELPGDFDVVINCTGLGSRKLFNDKSMFPVRGQVLKI
KAPWIKQFVTYDVENQDPMYILPNQEFVVVGGTTQKGDYNAKISLTDRKE
ILDKATKFIPSLKNAKVVGEWVGLRPAREKGPRIEIENFTLSNNRNLKVI
HNYGHGGCGMTIHWGCANHVAKLFDQVCSQQNTRLQTSKL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_033204XLOC_033204Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00052509TCONS_00052509Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006076FAD-dep_OxRdtase
IPR023209DAO
IPR006181D-amino_acid_oxidase_CS
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
GO:0003884D-amino-acid oxidase activity
GO:0071949FAD binding
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO:0046416D-amino acid metabolic process
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0046416 D-amino acid metabolic process
biological_process GO:0055114 oxidation-reduction process
molecular_function GO:0003884 D-amino-acid oxidase activity
molecular_function GO:0071949 FAD binding
molecular_function GO:0016491 oxidoreductase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006076FAD dependent oxidoreductasePFAMPF01266DAOcoord: 32..323
e-value: 1.1E-30
score: 107.4
NoneNo IPR availableGENE3D3.30.9.10coord: 133..277
e-value: 4.0E-35
score: 120.0
NoneNo IPR availableSUPERFAMILY54373FAD-linked reductases, C-terminal domaincoord: 190..278
NoneNo IPR availableSUPERFAMILY51971Nucleotide-binding domaincoord: 30..203
coord: 264..326
IPR023209D-amino-acid oxidasePIRSFPIRSF000189D-aa_oxidasecoord: 18..337
e-value: 1.8E-72
score: 242.2
IPR006181D-amino acid oxidase, conserved sitePROSITEPS00677DAOcoord: 299..317

Blast
[Close]
BLAST of TCONS_00052509-protein vs. Swiss-Prot (Human)
Match: OXDD (D-aspartate oxidase OS=Homo sapiens GN=DDO PE=2 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 3.075e-64
Identity = 123/340 (36.18%), Postives = 179/340 (52.65%), Query Frame = 0 
Query:    2 LNSKVITLMVFPTCVTYGMSIKDSHRPDEFSPSTTSDGAAGHWEPFWLGDTPVDVIKSYAKETFAYVMENIKNNPDSPDIGFFTCHGF-LLSKDETFKKPFWYDIPSDSRVLSKDDLKMFPSEARSGMSFTTVYTEGRRLVPYYIKRFQEMGGKVFQKLISSLDELPGDFDVVINCTGLGSRKLFNDKSMFPVRGQVLKIKAPWIKQFVTYDVENQDPMYILPNQEFVVVGGTTQKGDYNAKISLTDRKEILDKATKFIPSLKNAKVVGEWVGLRPAREKGPRIEIENFTLSNNRNLKVIHNYGHGGCGMTIHWGCANHVAKLFDQVCSQQNTRLQTSKL 340
            L++ V    + P C    +S       D+F+P TTSD AAG   P    DTP+   K + +ETF ++   I N+ ++ D G     G+ +     T + PFW D+    R +++ +LK FP     G +FTT+  E    +P+  KR +  GG    + I  L EL   FD+V+NC+GLGSR+L  D  +FPVRGQVL+++APW++ F+    +     YI P    V +GGT QKGD+N      + +EIL +     PSL  A  + E VGLRP R  G R++ E       R L V+H+YGHG  G+++HWG A   A+L  +      T +  S L
Sbjct:   16 LSTAVCISKLVPRCSVTIIS-------DKFTPDTTSDVAAGMLIPHTYPDTPIHTQKQWFRETFNHLFA-IANSAEAGDAGVHLVSGWQIFQSTPTEEVPFWADVVLGFRKMTEAELKKFPQYV-FGQAFTTLKCECPAYLPWLEKRIKGSGGWTLTRRIEDLWELHPSFDIVVNCSGLGSRQLAGDSKIFPVRGQVLQVQAPWVEHFIR---DGSGLTYIYPGTSHVTLGGTRQKGDWNLSPDAENSREILSRCCALEPSLHGACNIREKVGLRPYR-PGVRLQTELLARDGQR-LPVVHHYGHGSGGISVHWGTALEAARLVSECVHALRTPIPKSNL 341
The following BLAST results are available for this feature:
BLAST of TCONS_00052509-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
OXDD3.075e-6436.18D-aspartate oxidase OS=Homo sapiens GN=DDO PE=2 SV... [more]
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