TCONS_00052551-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00052551-protein
Unique NameTCONS_00052551-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1325

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00052551-protein ID=TCONS_00052551-protein|Name=TCONS_00052551-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1325bp
MDVEEGEVNNIDATYNKLLAANDIPDTVKYFAQLCELLDINPKNHKTVFT
TLKAKLKSWKYQNLFNKLEKRGKHQDYKNKPCAKTKVLIIGAGPVGLRLA
IECAFLGAHVTIIEKRNKFSRNNVLHLWPFLIVDLKGIGVKSFFGKFCSG
SLDHISIKRMQCILLKIALFLGVQFHVNVLFEDVIQPSEGKGWRAKISPS
SSPINGQEFDAICGCDGKYNCLKFKRKEFRGKLAIAITCNFVNKQTSEEA
RVEEISGVAFIYNQDFFHELKQKTGIELENIVYYRDETHYFVMTAKKKSL
LATGVIKQDCKDVFKLLSSDNVNHKNLLKFAKDAADFSTNYQLPHHQFAV
NHYQKEDVAMFDFTSIHQAENSSRIYERKGKRLLMCIAGDVLLEPFWPTG
SGCARGFLGAFDAAWMIRGLGLNRESLDILQERESIFQLLPQTKPDNLCR
KYDLYCIDPSTRYLNLNARSLRKEQISHLLDATDSKVNLADWAEKLTDHQ
KQLQERQREKKRKEKEIDPDHLLRWCKEQTKSYQNVTIIDMSRSWQNGLG
FCAIIHRYRPELIDYHSLKEEDARVNCEKAFEVAEEHLGIPPKIAARDFV
RSRNPDTLTVMAYLSLYYEALHQETPVFINQPNNENCNSRMNEQESSVLI
EPFTKNNTKYGIAVAIVASSAPKEKTPAKGGDTLKVEAQTIPVSPKSPVE
KKGKTSKMAIISRLSRRSKKSKLAKKAKHDRENQQTINEENDVQLQSYTK
KQEINGNALEHEKNAINASKKDEVQKKTSPMLRSRDNKLTNGNARNEPLE
NMEASKGQQRYKRISQLAESVFGDSIVQEGTKKGSGLRPRKESSVEGLSE
SELCHFCNRKVYVVERQSAEGLFFHRSCFRCTACKCRLLLGNYAFHCKDE
ETEGKFYCNVHYNSLLYKCGKEEEEERNLRPTQVVVKKESVKRRRAVTQQ
IMPSDVRAANYSRQLSNDDLDITTKSQQTYQVLNIQKKLKDNLPQLEVST
KDTKHKPYFTKTDVDKIDFSQTPEEKEDQIESPYDRFTPRSLLDRHPSLL
RCTPEKVTTKSFMAASKFSVSTPNLTKLIQEDSMFEEEKKKHEAKLNSQK
KKKLECSPTKEKKKLSVPDQLRDSNKPTNEDDQEIYGSDEYRQRYQSYVS
REDSFGAVHRRPQEERRAQYPVSMAFTEGMRIPGSAFRPISVDIDIDGAL
DLVEPPTSTQTEPEKAKPKKKKLVLRKKKKTPKPETIVEDESELIPSPIR
KISQGKDTSPQIPMSSKTTEDGPSKVSPVSPINPFTSPRQQEDRGRGMFS
DSSSSSESEEDERNNTLFKRAFGXK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_033234XLOC_033234Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00052551TCONS_00052551Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001715CH-domain
IPR001781Znf_LIM
IPR023753FAD/NAD-binding_dom
IPR002938FAD-bd
IPR011993PH_dom-like
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0016491oxidoreductase activity
GO:0071949FAD binding
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
molecular_function GO:0071949 FAD binding
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 489..516
NoneNo IPR availableGENE3D2.10.110.10coord: 847..907
e-value: 2.0E-10
score: 40.1
NoneNo IPR availableSUPERFAMILY57716Glucocorticoid receptor-like (DNA-binding domain)coord: 849..879
IPR001715Calponin homology domainSMARTSM00033ch_5coord: 518..617
e-value: 1.3E-17
score: 74.5
IPR001715Calponin homology domainGENE3D1.10.418.10coord: 524..628
e-value: 8.4E-24
score: 83.1
IPR001715Calponin homology domainPFAMPF00307CHcoord: 521..619
e-value: 2.4E-18
score: 66.2
IPR001715Calponin homology domainPROSITEPS50021CHcoord: 516..619
score: 14.226
IPR001715Calponin homology domainCDDcd00014CHcoord: 522..618
e-value: 9.01715E-15
score: 71.5731
IPR001715Calponin homology domainSUPERFAMILY47576Calponin-homology domain, CH-domaincoord: 381..621
IPR001781Zinc finger, LIM-typeSMARTSM00132lim_4coord: 853..911
e-value: 5.0E-4
score: 29.4
IPR001781Zinc finger, LIM-typePFAMPF00412LIMcoord: 854..913
e-value: 3.5E-5
score: 23.8
IPR001781Zinc finger, LIM-typePROSITEPS00478LIM_DOMAIN_1coord: 854..888
IPR001781Zinc finger, LIM-typePROSITEPS50023LIM_DOMAIN_2coord: 852..918
score: 11.514
IPR023753FAD/NAD(P)-binding domainGENE3D3.50.50.60coord: 75..523
e-value: 5.7E-19
score: 67.8
IPR023753FAD/NAD(P)-binding domainSUPERFAMILY51905FAD/NAD(P)-binding domaincoord: 85..234
coord: 377..463
IPR002938FAD-binding domainPFAMPF01494FAD_binding_3coord: 84..122
e-value: 1.8E-5
score: 24.1
IPR011993PH domain-likeGENE3D2.30.29.30coord: 908..1005
e-value: 0.0073
score: 16.2

Blast
[Close]
BLAST of TCONS_00052551-protein vs. Swiss-Prot (Human)
Match: MICA3 ([F-actin]-methionine sulfoxide oxidase MICAL3 OS=Homo sapiens GN=MICAL3 PE=1 SV=2)

HSP 1 Score: 681.404 bits (1757), Expect = 0.000e+0
Identity = 320/652 (49.08%), Postives = 446/652 (68.40%), Query Frame = 0 
Query:    8 VNNIDATYNKLLAANDIPDTVKYFAQLCELLDINPKNHKTVFTTLKAKLKSWKYQNLFNKLEKRGKHQDYK-NKPCAKTKVLIIGAGPVGLRLAIECAFLGAHVTIIEKRNKFSRNNVLHLWPFLIVDLKGIGVKSFFGKFCSGSLDHISIKRMQCILLKIALFLGVQFHVNVLFEDVIQPSEGK-----GWRAKISPSSSPINGQEFDAICGCDGKYNCLK-FKRKEFRGKLAIAITCNFVNKQTSEEARVEEISGVAFIYNQDFFHELKQKTGIELENIVYYRDETHYFVMTAKKKSLLATGVIKQDCKDVFKLLSSDNVNHKNLLKFAKDAADFSTNYQLPHHQFAVNHYQKEDVAMFDFTSIHQAENSSRIYERKGKRLLMCIAGDVLLEPFWPTGSGCARGFLGAFDAAWMIRGLGLNRESLDILQERESIFQLLPQTKPDNLCRKYDLYCIDPSTRYLNLNARSLRKEQISHLLDATDSK-VNLADWAEKLTDHQKQLQERQREK-KRKEKEIDPDHLLRWCKEQTKSYQNVTIIDMSRSWQNGLGFCAIIHRYRPELIDYHSLKEEDARVNCEKAFEVAEEHLGIPPKIAARDFVRSRNPDTLTVMAYLSLYYEALHQETPVFINQPNNENCNSRMNEQESSVLI 650
            +N     +++ + A     T+K F +LC+ L++ PK++++ +  LK+KL  WK + L+ KL+KRG H+DYK  K C  TK LIIGAGP GLR AI+ + LGA V +IEKR+ FSRNNVLHLWPF I DL+G+G K F+GKFC+G++DHISI+++Q ILLK+AL LG++ HVNV F+ +IQP E +     GWRA + P + P++  EF+ I G DG+ N L+ F+RKEFRGKLAIAIT NF+N+ T+ EA+VEEISGVAFI+NQ FF EL++ TGI+LENIVYY+D+THYFVMTAKK+SLL  GVI  D  D   LLS +NV+ + LL +A++AADFST  QLP   FA+NHY + DVAMFDFT ++ +EN++ + E+ G +LL+ + GD LLEPFWP G+G ARGFL A D+AWM+R   L    L++L ERESI++LLPQT P+N+ + +  Y IDP TRY N+N   LR  Q+ HL D  ++K ++L        + +  +  R   K  R E       LL WC+ QT  Y  V + D++ SW++GL  CAIIHRYRP+LID+ SL E++   N + AF++AE+ LGI P +  ++      PD L+++ YL+ +YE          + P+++  +  +N +E +VLI
Sbjct:    9 MNPAHVLFDRFVQATTCKGTLKAFQELCDHLELKPKDYRSFYHKLKSKLNYWKAKALWAKLDKRGSHKDYKKGKACTNTKCLIIGAGPCGLRTAIDLSLLGAKVVVIEKRDAFSRNNVLHLWPFTIHDLRGLGAKKFYGKFCAGAIDHISIRQLQLILLKVALILGIEIHVNVEFQGLIQPPEDQENERIGWRALVHPKTHPVSEYEFEVIIGGDGRRNTLEGFRRKEFRGKLAIAITANFINRNTTAEAKVEEISGVAFIFNQKFFQELREATGIDLENIVYYKDDTHYFVMTAKKQSLLDKGVILHDYADTELLLSRENVDQEALLSYAREAADFSTQQQLPSLDFAINHYGQPDVAMFDFTCMYASENAALVREQNGHQLLVALVGDSLLEPFWPMGTGIARGFLAAMDSAWMVRSWSLGTSPLEVLAERESIYRLLPQTTPENVSKNFSQYSIDPVTRYPNINVNFLRPSQVRHLYDTGETKDIHL--------EMESLVNSRTTPKLTRNESVARSSKLLGWCQRQTDGYAGVNVTDLTMSWKSGLALCAIIHRYRPDLIDFDSLDEQNVEKNNQLAFDIAEKELGISPIMTGKEMASVGEPDKLSMVMYLTQFYEMFKD------SLPSSDTLD--LNAEEKAVLI 644
The following BLAST results are available for this feature:
BLAST of TCONS_00052551-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MICA30.000e+049.08[F-actin]-methionine sulfoxide oxidase MICAL3 OS=H... [more]
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