TCONS_00052610-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00052610-protein
Unique NameTCONS_00052610-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length237

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00052610-protein ID=TCONS_00052610-protein|Name=TCONS_00052610-protein|organism=Clytia hemisphaerica|type=polypeptide|length=237bp
MHCDEEDHMLECEKFLLCCDYCTEAKIPRKKMDGHISNDCVKVPHSCPFK
TIGCHEKLLSGELAKHNPSSIENHLLLALNQINRQNEKIIKLQENLQKAS
RSQNNALIELRSSSVFSQVHVFKIQNFAQSLSFKEYFYSPHGYKFKTWTT
LNGESDISLWFQTVQSPFDDALEWPMKLEYLRCVIINKRLKGKLPRIMWN
GTDDMNSLILKPPHMTSVGWNRFIRSPKLASMMMMAH
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_033257XLOC_033257Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00052610TCONS_00052610Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001293Znf_TRAF
IPR008974TRAF-like
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 75..109
IPR001293Zinc finger, TRAF-typePFAMPF02176zf-TRAFcoord: 8..66
e-value: 1.9E-11
score: 44.3
IPR001293Zinc finger, TRAF-typePROSITEPS50145ZF_TRAFcoord: 8..54
score: 11.5
IPR008974TRAF-likeGENE3D2.60.210.10coord: 79..234
e-value: 3.8E-7
score: 29.6
IPR008974TRAF-likeSUPERFAMILY49599TRAF domain-likecoord: 117..230
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 27..66
e-value: 3.2E-6
score: 26.8
coord: 2..26
e-value: 0.058
score: 13.1

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00052610-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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