TCONS_00052670-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00052670-protein
Unique Name	TCONS_00052670-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	487

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00052670-protein ID=TCONS_00052670-protein|Name=TCONS_00052670-protein|organism=Clytia hemisphaerica|type=polypeptide|length=487bp
ILGTLFILLVSFLFYSWLRMKWSDKDWIYYPQGALPVIGHLLLLQDRKKY
HKLKDTWYRKSKGTYGVYFLFQRIILSIDLKVWEDLLSSQKYLDKGQGYW
ILEKFLGNGLVTSTGDLWKKRRRMITPAFHFEILNEFVSIMENRTLELIE
MLKKFHEKDESFNAFDITKPFSLSIICETSMGINLSIEETSSGRFKKMYE
RLIHVLFRRQLNPLMKNDWLYSMTADGKAFYAAFKEITAFVKEVIEKRIE
VQRNPDKAEEMKHTKRRIFIDTLLDSYEKGDIDVDGILNEVNTFVNAGYE
TTSTSLAWTLYCLGRNQRVQEKLYNEIIRFEKDKKLQMEDFKELPYLDLV
VKESLRLHPAITRFGRQIADGTVLGGKVFPDCTLVIDIVAMNRNPDVWED
PLTFNPERFETFDKQSKRNPFLYVPFSAGPRNCIGQKFALSELKAAVFHL
VKHLELISLQDESELKETFDLTHGCENGPMLKIKPRN

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_033275	XLOC_033275	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00052670	TCONS_00052670	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001128	Cyt_P450
IPR002403	Cyt_P450_E_grp-IV
IPR017972	Cyt_P450_CS

Vocabulary: **Molecular Function**
Term	Definition
GO:0005506	iron ion binding
GO:0020037	heme binding
GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0004497	monooxygenase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0055114	oxidation-reduction process

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055114	oxidation-reduction process
molecular_function	GO:0020037	heme binding
molecular_function	GO:0005506	iron ion binding
molecular_function	GO:0004497	monooxygenase activity
molecular_function	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001128	Cytochrome P450	PRINTS	PR00385	P450	coord: 297..314 score: 43.75 coord: 424..433 score: 59.5 coord: 349..360 score: 40.8 coord: 433..444 score: 44.85
IPR001128	Cytochrome P450	PFAM	PF00067	p450	coord: 33..465 e-value: 3.9E-89 score: 299.4
IPR001128	Cytochrome P450	SUPERFAMILY	48264	Cytochrome P450	coord: 22..486
IPR002403	Cytochrome P450, E-class, group IV	PRINTS	PR00465	EP450IV	coord: 433..451 score: 35.43 coord: 417..433 score: 33.94 coord: 344..360 score: 52.49 coord: 392..410 score: 32.39
None	No IPR available	GENE3D	1.10.630.10		coord: 13..487 e-value: 4.9E-110 score: 367.8
IPR017972	Cytochrome P450, conserved site	PROSITE	PS00086	CYTOCHROME_P450	coord: 426..435

Blast

[Close]

BLAST of TCONS_00052670-protein vs. Swiss-Prot (Human)
Match: CP4V2 (Cytochrome P450 4V2 OS=Homo sapiens GN=CYP4V2 PE=1 SV=2)

HSP 1 Score: 253.062 bits (645), Expect = 3.979e-78
Identity = 167/481 (34.72%), Postives = 256/481 (53.22%), Query Frame = 0

Query:   21 KWSDKDWIYYPQGALPVIGHLLLLQDRKKYHKLKDTWYRKSKGTYGVYFLFQRIILSIDLKVWED---LLSSQKYLDKGQGYWILEKFLGNGLVTSTGDLWKKRRRMITPAFHFEILNEFVSIMENRTLELIEMLKKFHEKDESFNAFDITKPFSLSIICETSMGINLSIEETSSGRFKKMYERLIHVLFRRQLNPLMKNDWLYSMTADGKAFYAAFKEITAFVKEVIEKRI-EVQRNPD-----KAEEMKHTKRRIFIDTLLDSY--EKGDIDVDGILNEVNTFVNAGYETTSTSLAWTLYCLGRNQRVQEKLYNEI--IRFEKDKKLQMEDFKELPYLDLVVKESLRLHPAITRFGRQIA-DGTVLGGKVFPDCTLVIDIVAMNRNPDVWEDPLTFNPERFETFDKQSKRNPFLYVPFSAGPRNCIGQKFALSELKAAVFHLVKHLELISLQDESELKETFDLTHGCENGPMLKIKPRN 487
            KW     I     A P++GH LL++   +    +   Y +      +  L+   +  + L   E+   +L+S K +DK   Y  LE +LG GL+TSTG+ W+ RR+M+TP FHF IL +F+ IM  +   L++ L+K H   E+FN F      +L IICET+MG N+  +      + +   R+  ++FRR   P +  D  Y M  +G     + + +  F   VI +R  E+  N D     +       KRR F+D LL     E   +  + I  EV+TF+  G++TT+ ++ W+LY LG N  VQ+K+ +E+  +  + D+   +ED K+L YL+ V+KE+LRL P++  F R ++ D  V G +V      VI   A++R+P  + +P  F PERF   + Q  R+P+ YVPFSAGPRNCIGQKFA+ E K  +  +++H  + S Q   EL     L     NG  +K+K RN
Sbjct:   43 KWQQMRPIPTVARAYPLVGHALLMKPDGREFFQQIIEYTEEYRHMPLLKLWVGPVPMVALYNAENVEVILTSSKQIDKSSMYKFLEPWLGLGLLTSTGNKWRSRRKMLTPTFHFTILEDFLDIMNEQANILVKKLEK-HINQEAFNCFFYITLCALDIICETAMGKNIGAQSNDDSEYVRAVYRMSEMIFRRIKMPWLWLDLWYLMFKEGWEHKKSLQILHTFTNSVIAERANEMNANEDCRGDGRGSAPSKNKRRAFLDLLLSVTDDEGNRLSHEDIREEVDTFMFEGHDTTAAAINWSLYLLGSNPEVQKKVDHELDDVFGKSDRPATVEDLKKLRYLECVIKETLRLFPSVPLFARSVSEDCEVAGYRVLKGTEAVIIPYALHRDPRYFPNPEEFQPERFFPENAQG-RHPYAYVPFSAGPRNCIGQKFAVMEEKTILSCILRHFWIESNQKREELGLEGQLILRPSNGIWIKLKRRN 521

The following BLAST results are available for this feature:

BLAST of TCONS_00052670-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00052670-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
CP4V2	3.979e-78	34.72	Cytochrome P450 4V2 OS=Homo sapiens GN=CYP4V2 PE=1...	[more]

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TCONS_00052670-protein (polypeptide) - C. hemisphaerica