TCONS_00052673-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00052673-protein
Unique NameTCONS_00052673-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length148

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00052673-protein ID=TCONS_00052673-protein|Name=TCONS_00052673-protein|organism=Clytia hemisphaerica|type=polypeptide|length=148bp
MALKRITKELTDLGRDPPAQCSAGPIDEKDMFKWQATIMGPTESPYQGGV
FFLTINFPPDYPFKPPKVTFVTRIYHPNINSNGSICLDILRQQWSPALTI
SKVLLSICSLLTDPNPEDPLVPEIARIYKSDRSRYSDLAKEWTKKYAM
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_033278XLOC_033278Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00052673TCONS_00052673Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000608UBQ-conjugat_E2
IPR016135UBQ-conjugating_enzyme/RWD
IPR023313UBQ-conjugating_AS
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00212ubc_7coord: 4..148
e-value: 2.8E-73
score: 259.4
IPR000608Ubiquitin-conjugating enzyme E2PFAMPF00179UQ_concoord: 5..142
e-value: 1.3E-53
score: 180.3
IPR000608Ubiquitin-conjugating enzyme E2PROSITEPS50127UBIQUITIN_CONJUGAT_2coord: 4..137
score: 48.134
IPR000608Ubiquitin-conjugating enzyme E2CDDcd00195UBCccoord: 4..143
e-value: 4.95383E-68
score: 203.973
IPR016135Ubiquitin-conjugating enzyme/RWD-likeGENE3D3.10.110.10coord: 1..148
e-value: 5.3E-77
score: 258.3
IPR016135Ubiquitin-conjugating enzyme/RWD-likeSUPERFAMILY54495UBC-likecoord: 1..148
IPR023313Ubiquitin-conjugating enzyme, active sitePROSITEPS00183UBIQUITIN_CONJUGAT_1coord: 75..90

Blast
[Close]
BLAST of TCONS_00052673-protein vs. Swiss-Prot (Human)
Match: UB2D2 (Ubiquitin-conjugating enzyme E2 D2 OS=Homo sapiens GN=UBE2D2 PE=1 SV=1)

HSP 1 Score: 261.151 bits (666), Expect = 3.203e-91
Identity = 123/148 (83.11%), Postives = 134/148 (90.54%), Query Frame = 0 
Query:    1 MALKRITKELTDLGRDPPAQCSAGPIDEKDMFKWQATIMGPTESPYQGGVFFLTINFPPDYPFKPPKVTFVTRIYHPNINSNGSICLDILRQQWSPALTISKVLLSICSLLTDPNPEDPLVPEIARIYKSDRSRYSDLAKEWTKKYAM 148
            MALKRI KEL DL RDPPAQCSAGP+ + DMF WQATIMGP +SPYQGGVFFLTI+FP DYPFKPPKV F TRIYHPNINSNGSICLDILR QWSPALTISKVLLSICSLL DPNP+DPLVPEIARIYK+DR +Y+ +A+EWT+KYAM
Sbjct:    1 MALKRIHKELNDLARDPPAQCSAGPVGD-DMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNRIAREWTQKYAM 147
The following BLAST results are available for this feature:
BLAST of TCONS_00052673-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
UB2D23.203e-9183.11Ubiquitin-conjugating enzyme E2 D2 OS=Homo sapiens... [more]
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