TCONS_00052748-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00052748-protein
Unique NameTCONS_00052748-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length200

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00052748-protein ID=TCONS_00052748-protein|Name=TCONS_00052748-protein|organism=Clytia hemisphaerica|type=polypeptide|length=200bp
MAQQETGSKYAVKLKPDFNNPKWINRHRFMFNFLDINGNGKITLDEIVSK
ASDDICAKLNASPEQTQRHQDAVEAFFKAIGMDYGKEVEFPEFLEGWKRL
ATNDLKLWSQNKTTLIRRWGDVVFDIFDKDGSGTISLDEWKAYGRVSGIC
ASDADAEQTFKHCDLDNSGKLDVDEMTRQHLGFWYTLDPQADGLYGNFVP
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_033351XLOC_033351Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00052748TCONS_00052748Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR018247EF_Hand_1_Ca_BS
IPR011992EF-hand-dom_pair
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005509 calcium ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainSMARTSM00054efh_1coord: 155..179
e-value: 29.0
score: 6.0
coord: 26..54
e-value: 1.6
score: 16.2
coord: 119..147
e-value: 1.4
score: 16.5
coord: 72..100
e-value: 150.0
score: 0.2
IPR002048EF-hand domainPFAMPF13833EF-hand_8coord: 28..48
e-value: 0.0042
score: 16.7
IPR002048EF-hand domainPFAMPF13202EF-hand_5coord: 159..177
e-value: 0.084
score: 12.3
IPR002048EF-hand domainPFAMPF00036EF-hand_1coord: 123..142
e-value: 5.2E-6
score: 25.5
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 68..103
score: 6.117
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 123..150
score: 10.943
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 22..57
score: 8.99
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 151..186
score: 9.52
IPR002048EF-hand domainCDDcd00051EFhcoord: 123..180
e-value: 1.2302E-14
score: 64.4913
NoneNo IPR availableGENE3D1.10.238.10coord: 87..134
e-value: 1.6E-7
score: 30.5
coord: 9..39
e-value: 0.0073
score: 15.6
NoneNo IPR availableGENE3D1.10.238.10coord: 40..86
e-value: 1.6E-6
score: 27.7
NoneNo IPR availableGENE3D1.10.238.10coord: 135..179
e-value: 1.0E-11
score: 44.1
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 128..140
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 35..47
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 164..176
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 20..195

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00052748-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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