TCONS_00052749-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00052749-protein
Unique NameTCONS_00052749-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length198

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00052749-protein ID=TCONS_00052749-protein|Name=TCONS_00052749-protein|organism=Clytia hemisphaerica|type=polypeptide|length=198bp
MADTASKYAVKLKTNFDDPKWVNRHRFMFNFLDINGDGKITLDEIVSKAS
DDICAKLGATPAQTKRHQDAVENFFKKIGMDYGKKVEFPQFVEGWKNLAT
HDLKLWSQNKKSLIRDWGEAVFDIFDKDGSGSISLDEWKAYGRISGICPS
DEDAERTFKHCDLDNSGKLDVDEMTRQHLGFWYTLDPNADGLYGNFVP
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_033352XLOC_033352Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00052749TCONS_00052749Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR018247EF_Hand_1_Ca_BS
IPR011992EF-hand-dom_pair
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005509 calcium ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainSMARTSM00054efh_1coord: 117..145
e-value: 1.8
score: 15.7
coord: 24..52
e-value: 1.2
score: 17.0
coord: 153..177
e-value: 32.0
score: 5.6
IPR002048EF-hand domainPFAMPF13202EF-hand_5coord: 28..44
e-value: 3.5E-4
score: 19.9
IPR002048EF-hand domainPFAMPF13499EF-hand_7coord: 121..175
e-value: 9.5E-8
score: 32.3
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 20..55
score: 9.074
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 66..101
score: 5.81
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 149..184
score: 9.632
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 119..148
score: 11.082
IPR002048EF-hand domainCDDcd00051EFhcoord: 119..178
e-value: 7.17227E-15
score: 64.8765
NoneNo IPR availableGENE3D1.10.238.10coord: 85..132
e-value: 4.0E-7
score: 29.3
coord: 6..37
e-value: 0.0024
score: 17.1
NoneNo IPR availableGENE3D1.10.238.10coord: 133..177
e-value: 8.3E-13
score: 47.7
NoneNo IPR availableGENE3D1.10.238.10coord: 38..84
e-value: 2.9E-6
score: 26.9
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 33..45
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 162..174
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 126..138
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 19..193

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00052749-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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