TCONS_00052803-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00052803-protein
Unique NameTCONS_00052803-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length478

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00052803-protein ID=TCONS_00052803-protein|Name=TCONS_00052803-protein|organism=Clytia hemisphaerica|type=polypeptide|length=478bp
MAFPDFPLTNEDNTATADQYTLSHHKDLNNNSTEHVSATTQEHIRNISNL
NISNKSILEKFEAMNKCIDYFQQQLQEHKGSINELEFSLTSHKRTQGPKE
DTDDDLHYESGCGLFPFIQKCLLNETKYYDTIRWVNKAEQEFKIVDPDNL
ATLWGQEKRKEGMTKRKLTRSLAYLVNAKKKLRRSSSRTFIYQIINKFGR
SMCPSPESNWEESPTTLEKSQPTPTMEQMKQILRQNPKYLQVLIDVQKQQ
KESIGSKNILKAGSKRSSNTQDQQVPEKSVKLNQESIFKTPQQQSQNNFI
DTASSFNWSQSYNNNNYSPSPANDSYVSFSPLSTSSDGSSNFSQVCDGNN
NFMSTTTSNFVSLSDSSNSIFSGDSLFNSGNSSSTLFNNNSTSNFMQQMS
TTVSTVNFTPENSTSSIFTTPVSDTNSYSQQVTSVPTNFTNPIAHSLVSD
VSDIGSIIPTFCLNRNSGLNNDIFAYLQ
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_033373XLOC_033373Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00052803TCONS_00052803Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000418Ets_dom
IPR011991WHTH_DNA-bd_dom
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0003700transcription factor activity, sequence-specific DNA binding
GO:0043565sequence-specific DNA binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
molecular_function GO:0043565 sequence-specific DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000418Ets domainSMARTSM00413etsneu2coord: 111..199
e-value: 2.0E-6
score: 28.3
IPR000418Ets domainPFAMPF00178Etscoord: 114..193
e-value: 4.0E-17
score: 62.4
IPR000418Ets domainPROSITEPS50061ETS_DOMAIN_3coord: 122..195
score: 13.478
IPR011991Winged helix-turn-helix DNA-binding domainGENE3D1.10.10.10coord: 105..198
e-value: 4.6E-16
score: 58.5
IPR011991Winged helix-turn-helix DNA-binding domainSUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 113..195
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 255..280
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 203..227

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00052803-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top