TCONS_00052830-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00052830-protein
Unique Name	TCONS_00052830-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	449

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00052830-protein ID=TCONS_00052830-protein|Name=TCONS_00052830-protein|organism=Clytia hemisphaerica|type=polypeptide|length=449bp
MSSNNTQNESKAPESTSNSSNHKSSSSSTKKTGTRVFKKSTPNGKVTVYI
GKRDFYDHIEHCEPVDGVVLVDRDHIKDKTVFCHVLAAFRYGREDLDVLG
LTFRKDLYLAKKQVYPPEIEEEEPLTRLQERLIKKLGKNAYPFKFMLPKN
TPSSVTLQPAPGDTGKPCGVDYELRVFLSETTDEKEYKKNSVRLAIRKIT
YAPSSEISQPPPMIETSKEFMMCPHPLFLEASLDKEMYYHGESIAVNVHI
SNRSNKTVKKIKLAVRQYADICLFSTAQYKCPVATIETEEGFPVGQSGTL
SKVIHITPLLADNKDKRGLALDGQLKHEDTNLASSTIMDSATQKENLGII
VHYKVKIRLVVNGIGNDLAVELPFTLSHPKPASPSPSPVVQRRYSEITQE
QDAEQPPIDSDLIKFDTDGPERQAHDDDLVFEEFARMRVRGEHQGEAHA

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_033385	XLOC_033385	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00052830	TCONS_00052830	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000698	Arrestin
IPR011022	Arrestin_C-like
IPR014753	Arrestin_N
IPR011021	Arrestin-like_N
IPR017864	Arrestin_CS
IPR014756	Ig_E-set

Vocabulary: **Biological Process**
Term	Definition
GO:0007165	signal transduction

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007165	signal transduction

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000698	Arrestin	PRINTS	PR00309	ARRESTIN	coord: 52..74 score: 62.55 coord: 426..440 score: 59.14 coord: 89..107 score: 80.98 coord: 183..200 score: 55.56 coord: 312..330 score: 73.51
IPR011022	Arrestin C-terminal-like domain	SMART	SM01017	Arrestin_C_2	coord: 223..381 e-value: 1.2E-28 score: 111.2
IPR011022	Arrestin C-terminal-like domain	PFAM	PF02752	Arrestin_C	coord: 225..380 e-value: 2.4E-24 score: 86.2
None	No IPR available	GENE3D	2.60.40.640		coord: 209..389 e-value: 5.1E-62 score: 208.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 379..424
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..39
IPR014753	Arrestin, N-terminal	GENE3D	2.60.40.840		coord: 34..204 e-value: 8.3E-82 score: 272.5
IPR011021	Arrestin-like, N-terminal	PFAM	PF00339	Arrestin_N	coord: 46..201 e-value: 1.4E-33 score: 115.9
IPR017864	Arrestin, conserved site	PROSITE	PS00295	ARRESTINS	coord: 89..107
IPR014756	Immunoglobulin E-set	SUPERFAMILY	81296	E set domains	coord: 210..388 coord: 422..443
IPR014756	Immunoglobulin E-set	SUPERFAMILY	81296	E set domains	coord: 34..203

Blast

[Close]

BLAST of TCONS_00052830-protein vs. Swiss-Prot (Human)
Match: ARRB1 (Beta-arrestin-1 OS=Homo sapiens GN=ARRB1 PE=1 SV=2)

HSP 1 Score: 487.649 bits (1254), Expect = 1.400e-171
Identity = 245/416 (58.89%), Postives = 312/416 (75.00%), Query Frame = 0

Query:   33 GTRVFKKSTPNGKVTVYIGKRDFYDHIEHCEPVDGVVLVDRDHIKDKTVFCHVLAAFRYGREDLDVLGLTFRKDLYLAKKQVYPPEIEEEEPLTRLQERLIKKLGKNAYPFKFMLPKNTPSSVTLQPAPGDTGKPCGVDYELRVFLSETTDEKEYKKNSVRLAIRKITYAPSSEISQPPPMIETSKEFMMCPHPLFLEASLDKEMYYHGESIAVNVHISNRSNKTVKKIKLAVRQYADICLFSTAQYKCPVATIETEEGFPVGQSGTLSKVIHITPLLADNKDKRGLALDGQLKHEDTNLASSTIMDSATQKENLGIIVHYKVKIRLVVNGIG-------NDLAVELPFTLSHPKPASPSPSPVVQRRYSEITQEQDAEQPPIDSDLIKFDTDGPERQAHDDDLVFEEFARMRVRG 441
            GTRVFKK++PNGK+TVY+GKRDF DHI+  +PVDGVVLVD +++K++ V+  +  AFRYGREDLDVLGLTFRKDL++A  Q +PP  E+++PLTRLQERLIKKLG++AYPF F +P N P SVTLQP P DTGK CGVDYE++ F +E  +EK +K+NSVRL IRK+ YAP  E   P P  ET+++F+M   PL LEASLDKE+YYHGE I+VNVH++N +NKTVKKIK++VRQYADICLF+TAQYKCPVA  E ++   V  S T  KV  +TP LA+N++KRGLALDG+LKHEDTNLASST++     +E LGIIV YKVK++LVV+  G       +D+AVELPFTL HPKP    P            +E    + P+D++LI+ DT+       DDD+VFE+FAR R++G
Sbjct:    5 GTRVFKKASPNGKLTVYLGKRDFVDHIDLVDPVDGVVLVDPEYLKERRVYVTLTCAFRYGREDLDVLGLTFRKDLFVANVQSFPPAPEDKKPLTRLQERLIKKLGEHAYPFTFEIPPNLPCSVTLQPGPEDTGKACGVDYEVKAFCAENLEEKIHKRNSVRLVIRKVQYAP--ERPGPQPTAETTRQFLMSDKPLHLEASLDKEIYYHGEPISVNVHVTNNTNKTVKKIKISVRQYADICLFNTAQYKCPVAMEEADDT--VAPSSTFCKVYTLTPFLANNREKRGLALDGKLKHEDTNLASSTLLREGANREILGIIVSYKVKVKLVVSRGGLLGDLASSDVAVELPFTLMHPKPKEEPPH-----------REVPENETPVDTNLIELDTN-------DDDIVFEDFARQRLKG 398

The following BLAST results are available for this feature:

BLAST of TCONS_00052830-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00052830-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
ARRB1	1.400e-171	58.89	Beta-arrestin-1 OS=Homo sapiens GN=ARRB1 PE=1 SV=2	[more]

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TCONS_00052830-protein (polypeptide) - C. hemisphaerica