TCONS_00052859-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00052859-protein
Unique NameTCONS_00052859-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length171

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00052859-protein ID=TCONS_00052859-protein|Name=TCONS_00052859-protein|organism=Clytia hemisphaerica|type=polypeptide|length=171bp
MLYISSRFDPEELTRFTLTVRRNYRRVPYHNWSHAFTVAHCMYCVVANSK
GLLTGLEAVALYVSCLCHDLDHRGKNNEWMKTESTPLAAVYTTSTLEHHH
FNQTITILQHEGHNIFSHLNSSEYKQXFFNDRNNWKGRIADVWWPMRAKL
NCFDISIKKFKKIYFSHSFLQ
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_033392XLOC_033392Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00052859TCONS_00052859Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023088PDEase
IPR002073PDEase_catalytic_dom
Vocabulary: Molecular Function
TermDefinition
GO:0008081phosphoric diester hydrolase activity
GO:00041143',5'-cyclic-nucleotide phosphodiesterase activity
Vocabulary: Biological Process
TermDefinition
GO:0007165signal transduction
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007165 signal transduction
molecular_function GO:0004114 3',5'-cyclic-nucleotide phosphodiesterase activity
molecular_function GO:0008081 phosphoric diester hydrolase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR0230883'5'-cyclic nucleotide phosphodiesterasePRINTSPR00387PDIESTERASE1coord: 68..83
score: 43.62
coord: 25..38
score: 56.43
coord: 94..110
score: 42.94
coord: 54..67
score: 36.0
IPR0020733'5'-cyclic nucleotide phosphodiesterase, catalytic domainGENE3D1.10.1300.10coord: 2..129
e-value: 1.9E-43
score: 148.2
IPR0020733'5'-cyclic nucleotide phosphodiesterase, catalytic domainPFAMPF00233PDEase_Icoord: 29..126
e-value: 9.4E-31
score: 107.2
NoneNo IPR availableCDDcd00077HDccoord: 29..111
e-value: 5.06309E-7
score: 44.2525
NoneNo IPR availableSUPERFAMILY109604HD-domain/PDEase-likecoord: 7..128

Blast
[Close]
BLAST of TCONS_00052859-protein vs. Swiss-Prot (Human)
Match: PDE10 (cAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A OS=Homo sapiens GN=PDE10A PE=1 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 1.827e-47
Identity = 73/124 (58.87%), Postives = 97/124 (78.23%), Query Frame = 0 
Query:    5 SSRFDPEELTRFTLTVRRNYRRVPYHNWSHAFTVAHCMYCVVANSKGLLTGLEAVALYVSCLCHDLDHRGKNNEWMKTESTPLAAVYTTSTLEHHHFNQTITILQHEGHNIFSHLNSSEYKQXF 128
            +S F+ E+L RF ++V++NYRRVPYHNW HA TVAHCMY ++ N+  L T LE   L ++CLCHDLDHRG +N +++    PLAA+Y+TST+E HHF+QT++ILQ EGHNIFS L+SSEY+Q  
Sbjct:  490 TSCFELEKLCRFIMSVKKNYRRVPYHNWKHAVTVAHCMYAILQNNHTLFTDLERKGLLIACLCHDLDHRGFSNSYLQKFDHPLAALYSTSTMEQHHFSQTVSILQLEGHNIFSTLSSSEYEQVL 613
The following BLAST results are available for this feature:
BLAST of TCONS_00052859-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PDE101.827e-4758.87cAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphod... [more]
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