TCONS_00052881-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00052881-protein
Unique NameTCONS_00052881-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length612

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00052881-protein ID=TCONS_00052881-protein|Name=TCONS_00052881-protein|organism=Clytia hemisphaerica|type=polypeptide|length=612bp
MNQSPRYCNRCGGRYYVPDSLRVTALTFNCYSCNQEGLDYHRRFPNLSGS
AWSGQSNGGLRNDYRPKIEIWSIESTGTPYKICSFKTGSKSNILDVRNEV
SRITGISLKDHRLYHYNRNLSTDRSQIKGNLLSDWEPVHKYYINVDKFIM
VVELKAKIKIMSIKNSEEICSFEIDKSSKIRHVKEMVAKEIDIPPEDQRL
YRYNEYCRMFKADWSKEEYDSGFVAIDQRNQNVLPLNDFDKIKYTFGVTN
KYIICVERNIVDEDTLRICRDRGISVIDMIPIMTINPPFPSMEILTVEVP
EGCSISNLKSIIHFKTGLSVKEQILTDGQERVLDDSYDILSSTEHCSKDW
ERMYLTLLSGGDHETQRICDRHNINCISTFKLNFLTKTVELKFQKFRLIS
DVKMQIQKEFNIRVGDQVLIYKGKKLTDNQITRNAFLENKLNTLKDVSLN
LVIDKKPFQVRISPEIQYISRFNISINDSDSIEVLKQKIQAKTSIPLQNI
QLKDNTTHEILCDTKIVEDCKFLDKSVITLQQKLFIRLHFEKDNRVEERV
EILPKYEQRSRLDLSEEIRKSFLPRQMSVNEIKGEFTFGHPTINRINEID
FRIKKTRKCLIM
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_033409XLOC_033409Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00052881TCONS_00052881Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000626Ubiquitin_dom
IPR029071Ubiquitin-rel_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000626Ubiquitin domainSMARTSM00213ubq_7coord: 460..533
e-value: 0.7
score: 16.3
coord: 378..442
e-value: 1.4
score: 13.4
IPR000626Ubiquitin domainPFAMPF14560Ubiquitin_2coord: 471..503
e-value: 0.27
score: 11.6
coord: 89..145
e-value: 0.35
score: 11.2
IPR000626Ubiquitin domainPFAMPF00240ubiquitincoord: 385..430
e-value: 4.9E-7
score: 29.3
IPR000626Ubiquitin domainPROSITEPS50053UBIQUITIN_2coord: 380..439
score: 9.613
NoneNo IPR availableGENE3D3.10.20.90coord: 454..561
e-value: 1.1E-6
score: 27.9
NoneNo IPR availableGENE3D3.10.20.90coord: 74..154
e-value: 0.029
score: 13.9
NoneNo IPR availableGENE3D3.10.20.90coord: 281..348
e-value: 0.0094
score: 15.2
NoneNo IPR availableGENE3D3.10.20.90coord: 377..451
e-value: 3.8E-8
score: 32.7
NoneNo IPR availableGENE3D3.10.20.90coord: 155..269
e-value: 1.7E-5
score: 24.2
NoneNo IPR availableCDDcd01769UBLcoord: 472..530
e-value: 0.00366812
score: 34.9354
NoneNo IPR availableCDDcd01769UBLcoord: 386..430
e-value: 2.37162E-5
score: 41.4838
NoneNo IPR availableCDDcd01769UBLcoord: 164..200
e-value: 0.00106178
score: 36.4762
IPR029071Ubiquitin-related domainSUPERFAMILY54236Ubiquitin-likecoord: 471..531
IPR029071Ubiquitin-related domainSUPERFAMILY54236Ubiquitin-likecoord: 278..342
IPR029071Ubiquitin-related domainSUPERFAMILY54236Ubiquitin-likecoord: 128..204
IPR029071Ubiquitin-related domainSUPERFAMILY54236Ubiquitin-likecoord: 385..431

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00052881-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top