TCONS_00052887-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00052887-protein
Unique NameTCONS_00052887-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length472

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00052887-protein ID=TCONS_00052887-protein|Name=TCONS_00052887-protein|organism=Clytia hemisphaerica|type=polypeptide|length=472bp
MANEDTSRRANLNSPILRGSENNSIESNTDLEKWRVQRRRTFLAFCLIIS
INGLECGIALPTLFTYLKENLKTPHLNIWYGLIASSYFITSNIGCLTVSR
YADHTKNIRLVLIATCLFVSLGNFIYATSKYAFVLLIGRLMQGFGDSLIS
TLSGETMRIYRKEEVVPKISTFMTAFFVSYIISPILITICGPVNFELYAG
VRLEDDNFPFIIVGFLWLLGSVLSYFVVCDLSKNNLLVQNEYDIQDGRQR
GETESEIQSNVEPQANDKMLPLRKLLFNRDLAFIYSITFVVNYFSGVFNA
IYVPIIANRFYEMALKYVGMLYAMNAIFFSLTMYLMTKLNYFNNEIYFIV
FGSSAMVIALQAMTMSVILTQFHLFGISMLITFAICTGVGWSVEQVLLTA
LSGKFVPLNMQSYAAGVRRTVGNTAHIIGQFLAPNLQDYIAEHCLVISVV
YLGLIGYAIIYRRRFTTAKMIG
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_033415XLOC_033415Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00052887TCONS_00052887Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011701MFS
IPR020846MFS_dom
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055085 transmembrane transport
cellular_component GO:0016021 integral component of membrane
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.1250.20coord: 267..469
e-value: 1.7E-8
score: 33.4
NoneNo IPR availableGENE3D1.20.1250.20coord: 18..266
e-value: 1.0E-19
score: 70.1
IPR011701Major facilitator superfamilyPFAMPF07690MFS_1coord: 46..429
e-value: 8.1E-21
score: 74.2
IPR020846Major facilitator superfamily domainPROSITEPS50850MFScoord: 41..468
score: 9.74
IPR020846Major facilitator superfamily domainCDDcd06174MFScoord: 42..460
e-value: 1.64845E-10
score: 60.0201
IPR020846Major facilitator superfamily domainSUPERFAMILY103473MFS general substrate transportercoord: 26..463

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00052887-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top