TCONS_00052924-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00052924-protein
Unique Name	TCONS_00052924-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	565

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00052924-protein ID=TCONS_00052924-protein|Name=TCONS_00052924-protein|organism=Clytia hemisphaerica|type=polypeptide|length=565bp
MNESESSSTTENSPLINKINQPGRKTSKSLPKEISRKYLKKSNNDRNNAN
RSPYMINSDQILNRSASTEDLRDVAQYKRYRYYSKLHGSMSEPLVIPAHV
LPRSFFFFKGDSGAKQSSIITIFAIWNTMMGTSLLSMPWALQQSGFMLGL
LLMAMMMCICLYTCLIILKSEKTLGLKTSVEFVDVCQHYLGAPAKYVAFT
FGVVAFLGAIIVYWVLMSNFLYKVGKFTHDHTVITPDNIPKAHFNYSTIY
HNARVVGEKRFPEVICHKHSNMNQTSPDITPSADNSFYNYWDQRKTVPLY
LIVVLLPLSSLKSPTFFTKFNALGTVSVLYILVFVIVRAVQWGPHLHFNV
PLAEGPTKLYNFGFPALTGILALALYIHNAILSILATNEKPENNTRDVTV
AYILTTGTYAFVAVLFYSFFPLDKSCIEQVFLDNFVSSDIMTFVAQCGLL
FQMTTVFPLLMYIVRIQILGFFLNRSDYSYLSIIIHNIVLISAGVLMAIF
YPNVGHIIRYVGSVSGMVYIFTLPSLVKMVIQYKDQSLKPTSILIHGALI
GLGLANFIAQFLVAE

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_033434	XLOC_033434	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00052924	TCONS_00052924	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR013057	AA_transpt_TM

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013057	Amino acid transporter, transmembrane domain	PFAM	PF01490	Aa_trans	coord: 296..534 e-value: 6.3E-14 score: 51.4 coord: 116..231 e-value: 2.4E-15 score: 56.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..34

Blast

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BLAST of TCONS_00052924-protein vs. Swiss-Prot (Human)
Match: S38A9 (Sodium-coupled neutral amino acid transporter 9 OS=Homo sapiens GN=SLC38A9 PE=1 SV=2)

HSP 1 Score: 362.459 bits (929), Expect = 8.998e-119
Identity = 213/540 (39.44%), Postives = 322/540 (59.63%), Query Frame = 0

Query:   50 NRSPYMINSDQILNRSASTEDLRD--VAQYKRYRYYSKLHGSMSEPLVIPAHVLP---RSFFFFKGDSG----------AKQSSIITIFAIWNTMMGTSLLSMPWALQQSGFMLGLLLMAMMMCICLYTCLIILKSEKTLGL--KTSVEFVDVCQHYLGAPAKYVAFTFGVVAFLGAIIVYWVLMSNFLYKVGKFTHD--HTVITPDNIPKAHFNYSTIYHNARVVGEKRFPEVICHKHSNMNQTSPDITPSADNSFYNYWDQRKTVPLYLIVVLLPLSSLKSPTFFTKFNALGTVSVLYILVFVIVRAVQWGPHLHFNVPLAEGPTKLY----NFGFPALTGILALALYIHNAILSILATNEKPENNTRDVTVAYILTTGTYAFVAVLFYSFFP---LDKSCIEQVFLDNFVSSDIMTFVAQCGLLFQMTTVFPLLMYIVRIQILGFFLNRSDYSYLSIIIHNIVLISAGVLMAIFYPNVGHIIRYVGSVSGMVYIFTLPSLVKMVIQYKDQSLKPTSILIHGALIGLGLANFIAQFLV 563
            ++ P+ I    I+N +   + + D   A  KR  YYS+L     + L+ P HV+P     + +    S            K +S++TIF IWNTMMGTS+LS+PW ++Q+GF  G+ ++ +M  + LY C  ++KS   +     TS E+ DVC+HY G+  ++ +  F +V+ +GA+IVYWVLMSNFL+  GKF  +  H +   D I   + +   I  +A   G      +I + +    Q            F  +WD+ +TVP YL+ +LLPL + KSP+FF+KFN LGTVSVLY++  V  +AV+ G HL F+  +   PT+ +     F FP LTG+L LA +IHN I+++L  N+K ENN RD+ +AY+L T TY ++ VL ++ FP   L K CIEQ FLDNF SSD ++F+A+  LLFQM TV+PLL Y+ R+Q+LG        S   ++I N++++ AGV+MA FYPN+G IIRY G+  G+ ++F  PSL+ ++  ++++ L    ++ H  +I LG+AN I QF +
Sbjct:   36 SKRPFCIEPTNIVNVNHVIQRVSDHASAMNKRIHYYSRLTTPADKALIAPDHVVPAPEECYVYSPLGSAYKLQSYTEGYGKNTSLVTIFMIWNTMMGTSILSIPWGIKQAGFTTGMCVIILMGLLTLYCCYRVVKSRTMMFSLDTTSWEYPDVCRHYFGSFGQWSSLLFSLVSLIGAMIVYWVLMSNFLFNTGKFIFNFIHHINDTDTILSTNNSNPVICPSAGSGGHPDNSSMIFYANDTGAQ-----------QFEKWWDKSRTVPFYLVGLLLPLLNFKSPSFFSKFNILGTVSVLYLIFLVTFKAVRLGFHLEFHWFI---PTEFFVPEIRFQFPQLTGVLTLAFFIHNCIITLLKNNKKQENNVRDLCIAYMLVTLTYLYIGVLVFASFPSPPLSKDCIEQNFLDNFPSSDTLSFIARIFLLFQMMTVYPLLGYLARVQLLGHIFGDIYPSIFHVLILNLIIVGAGVIMACFYPNIGGIIRYSGAACGLAFVFIYPSLIYIISLHQEERLTWPKLIFHVFIIILGVANLIVQFFM 561

The following BLAST results are available for this feature:

BLAST of TCONS_00052924-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00052924-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
S38A9	8.998e-119	39.44	Sodium-coupled neutral amino acid transporter 9 OS...	[more]

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TCONS_00052924-protein (polypeptide) - C. hemisphaerica