TCONS_00052926-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00052926-protein
Unique NameTCONS_00052926-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length186

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00052926-protein ID=TCONS_00052926-protein|Name=TCONS_00052926-protein|organism=Clytia hemisphaerica|type=polypeptide|length=186bp
MSMDEFRAKVLERGASSIKGIGRTFRIYDDDGNKSLNLEEFCEGVKDYGL
DFDADKCSELFKTFDKDGSGSLSFDEFLVGLRGNLNDGRMKIVKEAFKRA
DRSGDGVFDAKDMKRVYKVTEHPKYKNGEWDENQVFTDFLKSFEPDESKR
DGKVTEEEFINYYAGVSANIDNDAYFNLMLRNAWKI
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_033435XLOC_033435Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00052926TCONS_00052926Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR018247EF_Hand_1_Ca_BS
IPR011992EF-hand-dom_pair
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005509 calcium ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainSMARTSM00054efh_1coord: 20..48
e-value: 0.85
score: 18.3
coord: 56..84
e-value: 7.5E-4
score: 28.8
coord: 92..120
e-value: 2.2
score: 14.9
IPR002048EF-hand domainPFAMPF13499EF-hand_7coord: 22..78
e-value: 3.7E-9
score: 36.8
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 88..123
score: 10.58
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 150..169
score: 6.424
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 16..51
score: 11.054
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 52..87
score: 13.76
IPR002048EF-hand domainCDDcd00051EFhcoord: 23..82
e-value: 1.50301E-10
score: 52.9353
IPR002048EF-hand domainCDDcd00051EFhcoord: 56..115
e-value: 1.33223E-7
score: 44.8461
NoneNo IPR availableGENE3D1.10.238.10coord: 1..35
e-value: 7.5E-4
score: 18.8
coord: 68..106
e-value: 1.6E-11
score: 43.3
NoneNo IPR availableGENE3D1.10.238.10coord: 107..164
e-value: 1.1E-8
score: 34.4
NoneNo IPR availableGENE3D1.10.238.10coord: 36..67
e-value: 4.5E-14
score: 51.9
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 65..77
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 29..41
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 16..184

Blast
[Close]
BLAST of TCONS_00052926-protein vs. Swiss-Prot (Human)
Match: CAPSL (Calcyphosin-like protein OS=Homo sapiens GN=CAPSL PE=2 SV=4)

HSP 1 Score: 193.741 bits (491), Expect = 4.119e-63
Identity = 89/185 (48.11%), Postives = 132/185 (71.35%), Query Frame = 0 
Query:    2 SMDEFRAKVLERGASSIKGIGRTFRIYDDDGNKSLNLEEFCEGVKDYGLDFDADKCSELFKTFDKDGSGSLSFDEFLVGLRGNLNDGRMKIVKEAFKRADRSGDGVFDAKDMKRVYKVTEHPKYKNGEWDENQVFTDFLKSFEPDESKRDGKVTEEEFINYYAGVSANIDNDAYFNLMLRNAWKI 186
             ++  R + L RG++ IKG+GR FRI DDD N++L+ +EF +G+ DY +  + ++  ELF+ FDKDG+G++ F+EFL+ LR  ++  R +++ +AF++ D++GDGV   +D++ VY    HPKY+NGEW E QVF  FL +F+    K DG VT EEF+NYYAGVSA+ID D YF +M+R AWK+
Sbjct:   25 PIERLRLQCLARGSAGIKGLGRVFRIMDDDNNRTLDFKEFMKGLNDYAVVMEKEEVEELFRRFDKDGNGTIDFNEFLLTLRPPMSRARKEVIMQAFRKLDKTGDGVITIEDLREVYNAKHHPKYQNGEWSEEQVFRKFLDNFDSPYDK-DGLVTPEEFMNYYAGVSASIDTDVYFIIMMRTAWKL 208
The following BLAST results are available for this feature:
BLAST of TCONS_00052926-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CAPSL4.119e-6348.11Calcyphosin-like protein OS=Homo sapiens GN=CAPSL ... [more]
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