TCONS_00052952-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00052952-protein
Unique NameTCONS_00052952-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length984

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00052952-protein ID=TCONS_00052952-protein|Name=TCONS_00052952-protein|organism=Clytia hemisphaerica|type=polypeptide|length=984bp
SAPTEPRSLTAKHNQTGRQLIFSWQEPLPTNGDIIKYSACRLLVVKDKVD
VSGQTKHCEDTDGKTTTKTFTGLEQFSKYKLFVKAHNSVGMSEEVYINAT
TYEGVPTEVRNFQLNTSTTTSLTVQWDEPTNIFGVLTGYMVRYGLANSGS
FNLVPACRMTRLRQCKIDGLLAYTDYDVQIEVKNDVHNNVTTLKFKTKTG
DPPPFSGNLPAPNKDDVTTNSFTVKLIEFDETNGPVKRYIIVAKKLKSSV
TPTVDPYTYTEDDINNGNDGLFVVKIITDRALFGTTVTIKSTSTTSKRRR
RDITEKSFTLEADTYYTTFIRGETEDGNHRTTTWYTPIRLAADGLGAGAI
AGIVVAIVLIVFLIIVLWYCLYYRRNHAKKEGHIVQMSNMANKKSVKIPT
VDPHQPIATNRFEDHVNQLKAHSNYGFSQEYSMINRELEYSYNYSRLQDN
NIKNRYHNVPAYDDTRVTLNVMDGESHTDYINANYIDGYERNREYIATQG
PLPETIFDFWRMAWESDSTAIVMLTRIEEKGRIKCAHYWPDNGSMALKDI
LITMTDSQEFPDHVVRTFHITRTGQSVERIVKQFHFVAWPDFGVPADPAA
ILGFIRKVNNWRLVSPGGPAIIHCSAGVGRTGTYITIDSQIRSMKSKSEL
QIYKNVSLLRQQRCLMVQTEDQYVFIHMALLDYMESGETEVDANGLRDYI
RKHMQTEHKTGMTGLMDEFIRLAKTDKKDRFSEANKMVNQAKNRFKNVYP
YDDTRVKLSQRPGVEGSDYINANYIDSYGCKDSFIATQAPLESTIGDFWR
MIWEQNCGTIVMLSKEFEGQQSKVHPYWPQKGSPKIEHFIVETTNGPTTY
GDYIVREMKLTNTEAGSSRMVKQFQYTTWPDSGSPESGVGIIDLIGQVQK
WNSSHHNGIITVHCSAGVGRTGVFIALTNLIERVKTEGVVDVYQTVKKMR
QQRTAMVQTRDQYEFCYRALQEYLESFDVYANFH
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_033440XLOC_033440Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00052952TCONS_00052952Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000242PTPase_domain
IPR003595Tyr_Pase_cat
IPR003961FN3_dom
IPR013783Ig-like_fold
IPR029021Prot-tyrosine_phosphatase-like
IPR016130Tyr_Pase_AS
IPR000387TYR_PHOSPHATASE_dom
Vocabulary: Biological Process
TermDefinition
GO:0006470protein dephosphorylation
GO:0016311dephosphorylation
Vocabulary: Molecular Function
TermDefinition
GO:0004725protein tyrosine phosphatase activity
GO:0005515protein binding
GO:0016791phosphatase activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016311 dephosphorylation
biological_process GO:0006470 protein dephosphorylation
molecular_function GO:0016791 phosphatase activity
molecular_function GO:0005515 protein binding
molecular_function GO:0004725 protein tyrosine phosphatase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000242PTP type protein phosphatasePRINTSPR00700PRTYPHPHTASEcoord: 479..486
score: 79.71
coord: 579..596
score: 50.23
coord: 495..515
score: 67.62
coord: 619..637
score: 66.47
coord: 940..955
score: 38.86
coord: 956..966
score: 60.75
IPR000242PTP type protein phosphataseSMARTSM00194PTPc_3coord: 426..685
e-value: 6.9E-121
score: 417.6
coord: 714..975
e-value: 1.1E-116
score: 403.7
IPR000242PTP type protein phosphatasePFAMPF00102Y_phosphatasecoord: 450..681
e-value: 4.4E-77
score: 258.7
coord: 739..971
e-value: 1.8E-79
score: 266.6
IPR000242PTP type protein phosphatasePROSITEPS50055TYR_PHOSPHATASE_PTPcoord: 427..683
score: 54.503
IPR000242PTP type protein phosphatasePROSITEPS50055TYR_PHOSPHATASE_PTPcoord: 715..973
score: 53.557
IPR003595Protein-tyrosine phosphatase, catalyticSMARTSM00404ptp_7coord: 870..972
e-value: 2.4E-38
score: 143.4
coord: 580..682
e-value: 1.2E-36
score: 137.7
IPR003961Fibronectin type IIISMARTSM00060FN3_2coord: 106..189
e-value: 5.4E-5
score: 32.6
coord: 3..92
e-value: 5.8E-6
score: 35.8
IPR003961Fibronectin type IIIPFAMPF00041fn3coord: 5..92
e-value: 1.7E-6
score: 28.2
coord: 108..186
e-value: 2.2E-8
score: 34.2
IPR003961Fibronectin type IIIPROSITEPS50853FN3coord: 108..202
score: 14.194
IPR003961Fibronectin type IIIPROSITEPS50853FN3coord: 5..104
score: 12.947
IPR003961Fibronectin type IIICDDcd00063FN3coord: 106..185
e-value: 6.3892E-6
score: 44.4095
IPR003961Fibronectin type IIICDDcd00063FN3coord: 3..101
e-value: 3.99198E-5
score: 41.7131
IPR003961Fibronectin type IIISUPERFAMILY49265Fibronectin type IIIcoord: 290..334
coord: 163..244
IPR003961Fibronectin type IIISUPERFAMILY49265Fibronectin type IIIcoord: 2..190
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 196..341
e-value: 0.026
score: 14.2
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 104..195
e-value: 1.4E-14
score: 53.5
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 1..103
e-value: 2.9E-13
score: 49.4
IPR029021Protein-tyrosine phosphatase-likeGENE3D3.90.190.10coord: 398..693
e-value: 1.2E-105
score: 352.5
coord: 696..980
e-value: 1.9E-104
score: 348.5
IPR029021Protein-tyrosine phosphatase-likeSUPERFAMILY52799(Phosphotyrosine protein) phosphatases IIcoord: 689..974
IPR029021Protein-tyrosine phosphatase-likeSUPERFAMILY52799(Phosphotyrosine protein) phosphatases IIcoord: 404..684
NoneNo IPR availableGENE3D1.20.5.100coord: 343..380
e-value: 5.9E-9
score: 34.9
NoneNo IPR availableCDDcd00047PTPccoord: 453..682
e-value: 1.70372E-106
score: 331.858
NoneNo IPR availableCDDcd00047PTPccoord: 742..972
e-value: 2.43842E-108
score: 336.48
IPR016130Protein-tyrosine phosphatase, active sitePROSITEPS00383TYR_PHOSPHATASE_1coord: 622..632
IPR016130Protein-tyrosine phosphatase, active sitePROSITEPS00383TYR_PHOSPHATASE_1coord: 912..922
IPR000387Tyrosine specific protein phosphatases domainPROSITEPS50056TYR_PHOSPHATASE_2coord: 602..674
score: 19.206
IPR000387Tyrosine specific protein phosphatases domainPROSITEPS50056TYR_PHOSPHATASE_2coord: 892..964
score: 20.25

Blast
BLAST of TCONS_00052952-protein vs. Swiss-Prot (Human)
Match: PTPRD (Receptor-type tyrosine-protein phosphatase delta OS=Homo sapiens GN=PTPRD PE=1 SV=2)

HSP 1 Score: 608.216 bits (1567), Expect = 0.000e+0
Identity = 383/1020 (37.55%), Postives = 536/1020 (52.55%), Query Frame = 0
Query:   16 TGRQLIFSWQEPL--PTNGDIIKYSACRLLVVKDKVDVSGQTKHCEDTDGKTTTKTFTGLEQFSKYKLFVKAHNSVGMSEEVYINATTYEGVPTE---VRNFQLNTSTTTSLTVQWDEPTNIFGVLTGYMVRYGLANSGSFNLVPACRMTRLRQCKIDGLLAYTDYDVQIEVKNDVHNNVTTLKFKTKTGDPPPFSGNLPAPNKDDVTTNSFTVKLIEFDETNGPVKRYIIVAKKLKSSVTPTVDPYTYTEDDINNGNDGLFVVKIITDRAL-FGTTVTIKSTSTTSKRRRRDITEKSFTLEADTYYTTFIRGETEDGN-----------HRTTTWYT--------------PIRLAADGLGAGAIAGIVVAIVLIVFLIIVLWYCLYYRRNHAKKEGHIVQMSNMANKKSV----------------KIPTVDPHQPIATNRFEDHVNQLKAHSNYGFSQEYSMINRELEYSYNYSRLQDNNIKNRYHNVPAYDDTRVTLNVMDGESHTDYINANYIDGYERNREYIATQGPLPETIFDFWRMAWESDSTAIVMLTRIEEKGRIKCAHYWPDNGSMALKDILITMTDSQEFPDHVVRTFHITRTGQSVERIVKQFHFVAWPDFGVPADPAAILGFIRKVNNWRLVSP--GGPAIIHCSAGVGRTGTYITIDSQIRSMKSKSELQIYKNVSLLRQQRCLMVQTEDQYVFIHMALLDYMESGETEVDANGLRDYIRKHMQTEHKTGMTGLMDEFIRLAKTDKK-DRFSEANKMVNQAKNRFKNVYPYDDTRVKLSQRPGVEGSDYINANYIDSYGCKDSFIATQAPLESTIGDFWRMIWEQNCGTIVMLSKEFEGQQSKVHPYWPQKGSPKIEHFIVETT---NGPTTYGDYIVREMKLTNTEAGSSRMVKQFQYTTWPDSGSPESGVGIIDLIGQVQKWNSSH-HNGIITVHCSAGVGRTGVFIALTNLIERVKTEGVVDVYQTVKKMRQQRTAMVQTRDQYEFCYRALQEYLESFDVYA 981
            T   +  SWQ P+    NG I KY+   LL     + +    +     D   TT T TGL+  + Y + V+AH S G     Y  +  +  +P +    +NF +     TS+ + W+ P N +     + + Y   + G        R T   Q  I  L     Y     V  +  N+   L+ +      P      PA           TV+L E    N  +K Y I+   LK S    + P+  + D++    D L        R++ +G  V +K           D+    FTL  D +Y  F   + + G            H  +  Y               P  +  +  G   + G V+A+V I+ ++I +   L Y+R  A+ +    + S++ N K +                + P +  H PI      DH+ +LKA+ N  FSQEY  I+   ++++ +S L+ N  KNRY NV AYD +RV L+ ++G   +DY+NANYIDGY +   YIATQG LPET  DFWRM WE  S  +VM+T++EE+ R+KC  YWP  G+     + +T+ D+ E   + VRTF + + G S +R V+QF F AWPD GVP  P   L F+R+V   +  +P   GP ++HCSAGVGRTG +I ID+ +  +K +  + IY +V+L+R QR  MVQTEDQY+FIH ALL+ +  G TEV A  L  YI+K  Q E    +TG+  EF RLA +     RF  AN   N+ KNR  N+ PY+ TRV L    GVEGSDYINA++ID Y  + ++IATQ PL  T  DFWRM+WE N   +VML+K  E  + K H YWP + S + ++F+V+     N P     YI+RE K+T+   G SR V+QFQ+T WP+ G P+SG G ID IGQV K       +G I+VHCSAGVGRTGVFI L+ ++ER++ EGVVD++QTVK +R QR AMVQT DQY+F YRA  EYL SFD YA
Sbjct:  931 TSTSVQLSWQPPVLAERNGIITKYT---LLYRDINIPLLPMEQLIVPAD---TTMTLTGLKPDTTYDVKVRAHTSKGPGP--YSPSVQFRTLPVDQVFAKNFHVKAVMKTSVLLSWEIPEN-YNSAMPFKILY---DDGKMVEEVDGRAT---QKLIVNLKPEKSYSF---VLTNRGNSAGGLQHRVTAKTAPDVLRTKPAFIGKTNLDGMITVQLPEVP-ANENIKGYYIIIVPLKKSRGKFIKPWE-SPDEMEL--DELLKEISRKRRSIRYGREVELKPYIAA----HFDVLPTEFTLGDDKHYGGFTNKQLQSGQEYVFFVLAVMEHAESKMYATSPYSDPVVSMDLDPQPITDEEEGLIWVVGPVLAVVFIICIVIAI---LLYKRKRAESDS---RKSSIPNNKEIPSHHPTDPVELRRLNFQTPGMASHPPIPILELADHIERLKANDNLKFSQEYESIDPGQQFTWEHSNLEVNKPKNRYANVIAYDHSRVLLSAIEGIPGSDYVNANYIDGYRKQNAYIATQGSLPETFGDFWRMIWEQRSATVVMMTKLEERSRVKCDQYWPSRGTETHGLVQVTLLDTVELATYCVRTFALYKNGSSEKREVRQFQFTAWPDHGVPEHPTPFLAFLRRV---KTCNPPDAGPMVVHCSAGVGRTGCFIVIDAMLERIKHEKTVDIYGHVTLMRAQRNYMVQTEDQYIFIHDALLEAVTCGNTEVPARNLYAYIQKLTQIETGENVTGMELEFKRLASSKAHTSRFISANLPCNKFKNRLVNIMPYESTRVCLQPIRGVEGSDYINASFIDGYRQQKAYIATQGPLAETTEDFWRMLWEHNSTIVVMLTKLREMGREKCHQYWPAERSARYQYFVVDPMAEYNMP----QYILREFKVTDARDGQSRTVRQFQFTDWPEQGVPKSGEGFIDFIGQVHKTKEQFGQDGPISVHCSAGVGRTGVFITLSIVLERMRYEGVVDIFQTVKMLRTQRPAMVQTEDQYQFSYRAALEYLGSFDHYA 1911          
The following BLAST results are available for this feature:
BLAST of TCONS_00052952-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PTPRD0.000e+037.55Receptor-type tyrosine-protein phosphatase delta O... [more]
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