TCONS_00052953-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00052953-protein
Unique NameTCONS_00052953-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length879

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00052953-protein ID=TCONS_00052953-protein|Name=TCONS_00052953-protein|organism=Clytia hemisphaerica|type=polypeptide|length=879bp
MKFCSLVLLTSLIINVSGNSVDLSFLPAQPIVGQRLEVKCALANPDPSIA
FFGYRFTKAGTTQSKYDLQSFPKSKVIEKFSQDNIGTYSCEARDKDGNTP
FFMRTPISVPLPALTVTLTADTHEPLIGNNITLTCNAVNTSNSEINTWNL
YRNDSLLITQSNNTFQVTTNEFSNEYFCSAKSDWTFDANSTKIQIKARAF
SGIRILVNEPYPVHNSSFTLTCTIDKLINTEVSYWTFQLNENTVQNSTLS
TLTVDKASDNNTGNYTCTVVSDMADIVTSEKLSVLTRDAAKVSITKASVI
INNHQLAWVNNATEVQLTCNSPLASPQYSWSKDGISLDHDTSTYVANLVV
PDGAGKYMCSDGQPASNAIQIQMLTLTRVDLTISPSNPFEGDTIIFNCSV
PETDSDITSWTFRKGDTVLQTGSNHQFNLTSSATLADNEIYTCEATHNSS
ASMNSTGQTLSVQELFAKPTISFGSKSAFKTGDKVVISCSTIVRKENTEA
SYSIRNKNNEEISATKNITIDPIKTGNQGDHSCRVTANGITKDSGTKILF
VNLGLSIPTSATVNEGSALSINCTLGGGESGASFTWTENESTIPGQTSQM
LRIENVNRTMHQSEYKCNAVLGGFNAASNTANLTVNYLDKPTIAGNTKVN
EHDVLSLQCVSTGRPTITTYKWFLNGTEIVDATSQRYEKAGFEQSMSGDY
SCEVSNGELNQKSDNVAVMALYLGTPTITVNPTDGIPVKENNNLTLTCNI
ASATSLNRSSLNYNWTKGGESLSTNQVLELVNIKKQDAGNYTCTVTSDAT
SLSAMANVNVIVHFAPHGISISEEGRQVLLKGSLFNARCSVDSLGLPIGE
LKWFKKKKSIVKTEESRDLYLSFVGDGVQ
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_033441XLOC_033441Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00052953TCONS_00052953Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003599Ig_sub
IPR003598Ig_sub2
IPR013783Ig-like_fold
IPR007110Ig-like_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003599Immunoglobulin subtypeSMARTSM00409IG_3ccoord: 644..721
e-value: 0.49
score: 19.4
coord: 558..636
e-value: 1.9E-6
score: 37.5
coord: 120..196
e-value: 40.0
score: 6.2
coord: 383..463
e-value: 0.53
score: 19.3
coord: 474..551
e-value: 30.0
score: 7.4
coord: 208..285
e-value: 3.0
score: 16.0
coord: 733..813
e-value: 1.6E-9
score: 47.6
coord: 25..110
e-value: 28.0
score: 7.6
IPR003598Immunoglobulin subtype 2SMARTSM00408igc2_5coord: 213..274
e-value: 0.41
score: 10.8
coord: 739..800
e-value: 8.1E-5
score: 32.0
coord: 31..97
e-value: 0.25
score: 13.0
coord: 389..450
e-value: 0.4
score: 11.0
coord: 564..624
e-value: 0.37
score: 11.2
NoneNo IPR availablePFAMPF13927Ig_3coord: 726..796
e-value: 3.3E-10
score: 40.3
NoneNo IPR availableGENE3D2.60.40.1290coord: 445..541
e-value: 3.0E-7
score: 29.9
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 555..640
e-value: 5.0E-10
score: 38.6
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 21..129
e-value: 5.2E-5
score: 22.8
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 641..719
e-value: 2.1E-9
score: 36.8
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 785..871
e-value: 2.3E-10
score: 40.0
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 724..784
e-value: 1.7E-11
score: 43.7
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 207..285
e-value: 4.4E-6
score: 26.3
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 389..444
e-value: 4.3E-7
score: 29.5
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 296..377
e-value: 1.5E-5
score: 24.4
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 130..197
e-value: 0.0028
score: 17.3
IPR007110Immunoglobulin-like domainPFAMPF13895Ig_2coord: 641..719
e-value: 2.4E-6
score: 27.7
coord: 382..455
e-value: 1.3E-7
score: 31.7
IPR007110Immunoglobulin-like domainPROSITEPS50835IG_LIKEcoord: 364..461
score: 9.301
IPR007110Immunoglobulin-like domainPROSITEPS50835IG_LIKEcoord: 215..283
score: 9.591
IPR007110Immunoglobulin-like domainPROSITEPS50835IG_LIKEcoord: 641..717
score: 9.809
IPR007110Immunoglobulin-like domainPROSITEPS50835IG_LIKEcoord: 112..194
score: 8.557
IPR007110Immunoglobulin-like domainPROSITEPS50835IG_LIKEcoord: 726..809
score: 14.056
IPR007110Immunoglobulin-like domainPROSITEPS50835IG_LIKEcoord: 546..634
score: 10.081
IPR007110Immunoglobulin-like domainPROSITEPS50835IG_LIKEcoord: 315..359
score: 7.177
IPR007110Immunoglobulin-like domainSUPERFAMILY48726Immunoglobulincoord: 557..638
IPR007110Immunoglobulin-like domainSUPERFAMILY48726Immunoglobulincoord: 214..276
IPR007110Immunoglobulin-like domainSUPERFAMILY48726Immunoglobulincoord: 116..196
IPR007110Immunoglobulin-like domainSUPERFAMILY48726Immunoglobulincoord: 305..403
IPR007110Immunoglobulin-like domainSUPERFAMILY48726Immunoglobulincoord: 379..462
IPR007110Immunoglobulin-like domainSUPERFAMILY48726Immunoglobulincoord: 722..810
IPR007110Immunoglobulin-like domainSUPERFAMILY48726Immunoglobulincoord: 645..714

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00052953-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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