TCONS_00053026-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00053026-protein
Unique NameTCONS_00053026-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length268

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00053026-protein ID=TCONS_00053026-protein|Name=TCONS_00053026-protein|organism=Clytia hemisphaerica|type=polypeptide|length=268bp
MATSSSTSQQRIVIVGCGIAGLELSLFLLKKKRDFLIINPTDYFHVTFAS
VRSVALQGWANKTMIPLQPTLGDHFKMGKVVEILPNADQTSNAGGKVLLE
SGEEVKYDRLVIATGTREQWPVRLYEMEKEEALRRYEKLCEKAKSSKQVV
VIGGGATGVEIAAEFKTILPNIDVTLINSNRQLVGPFSERSQQALQTQLS
TQFGIKLVLEERVTNLNELEQCGNGCVKTNKGTEIEADLIFKVIGDRINA
TAYEKGLGKNFTFCADFF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_033491XLOC_033491Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00053026TCONS_00053026Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000103Pyridine_nuc-diS_OxRdtase_2
IPR023753FAD/NAD-binding_dom
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
molecular_function GO:0016491 oxidoreductase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 122..142
NoneNo IPR availablePRINTSPR00368FADPNRcoord: 237..253
score: 23.06
coord: 12..31
score: 24.64
coord: 148..166
score: 40.5
coord: 107..125
score: 24.38
IPR000103Pyridine nucleotide-disulphide oxidoreductase, class-IIPRINTSPR00469PNDRDTASEIIcoord: 144..168
score: 34.44
coord: 11..33
score: 25.87
coord: 108..116
score: 38.48
IPR023753FAD/NAD(P)-binding domainGENE3D3.50.50.60coord: 101..222
e-value: 2.7E-21
score: 75.4
IPR023753FAD/NAD(P)-binding domainGENE3D3.50.50.60coord: 2..100
e-value: 7.5E-11
score: 41.4
IPR023753FAD/NAD(P)-binding domainPFAMPF07992Pyr_redox_2coord: 11..255
e-value: 6.6E-32
score: 110.8
IPR023753FAD/NAD(P)-binding domainSUPERFAMILY51905FAD/NAD(P)-binding domaincoord: 4..246

Blast
[Close]
BLAST of TCONS_00053026-protein vs. Swiss-Prot (Human)
Match: AIFM2 (Apoptosis-inducing factor 2 OS=Homo sapiens GN=AIFM2 PE=1 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 7.158e-26
Identity = 80/228 (35.09%), Postives = 129/228 (56.58%), Query Frame = 0 
Query:   35 FLIINPTDYFHVTFASVRSVALQGWANKTMIPLQPTLGDHFKMGKVVEI-LPNADQTSNAGGKVLLESGEEVKYDRLVIATGTREQWPVRLYEMEKEEA-LRRYEKLCEKAKSSKQVVVIGGGATGVEIAAEFKTILPNIDVTLINSNRQLVGPFSERSQQALQTQLSTQFGIKLVLEERVTNLNEL---EQCGNGCVKTNKGTEIEADLIFKVIGDRINATAYEKGL 257
            F++++  D FH   A++R+    G+A KT I    T  D+F+ G VV I L N          VLL+ GE + +  L++ATG+   +P +  E+  ++A ++ YE +  + + S+ +VV+GGG+ GVE+AAE KT  P  +VTLI+S   L       S +    ++  + G++L+L ERV+NL EL   E      V+T+KGTE+  +L+    G +IN++AY K  
Sbjct:   37 FMLVDMKDSFHHNVAALRASVETGFAKKTFISYSVTFKDNFRQGLVVGIDLKNQ--------MVLLQGGEALPFSHLILATGSTGPFPGKFNEVSSQQAAIQAYEDMVRQVQRSRFIVVVGGGSAGVEMAAEIKTEYPEKEVTLIHSQVALADKELLPSVRQEVKEILLRKGVQLLLSERVSNLEELPLNEYREYIKVQTDKGTEVATNLVILCTGIKINSSAYRKAF 256
The following BLAST results are available for this feature:
BLAST of TCONS_00053026-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
AIFM27.158e-2635.09Apoptosis-inducing factor 2 OS=Homo sapiens GN=AIF... [more]
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