TCONS_00053058-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00053058-protein
Unique Name	TCONS_00053058-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	751

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00053058-protein ID=TCONS_00053058-protein|Name=TCONS_00053058-protein|organism=Clytia hemisphaerica|type=polypeptide|length=751bp
MESEKRESSIDTNLTTDESPSRPLKRLTKKESRLNQFLKDLVSNAEQHKS
RSIFLRTIQDRSSIVYNNKDRKNMATHGNSVVDNIFDSVLKDSLHRRIRR
LTADIEGNIKIKESKDGTKLPAIVMMDTHVNLETPRIVPRPFSPVEKQSA
KMFLKKIKAFKERRRKNCSIVLLGKMALYSKRLLTSMASFSYDNTPKTTV
MEAWELANSSNEESYLSNTLIPFNREDFTKNAEHVGCEVPTWAKEVLRRE
GPSRTVNDVYGLLRMLSILKKFNEKFTYSVRAVMCRMFTYSKVPRKRIVL
REGHIGHDFYLIYTGSVFVNKQVFNKFTQKNEWKTVNVLRRGDSFGELAL
LQLNSFRSATIVTRDDTEFLIVPRDVFSNVCPKALDAELNIKIDLIKETR
VFQTWSEESLQALCLDSRVNQYPTNSVIVGNSKRNEEWLFMCLEGKCMAV
KRLKFDPKDYATTPCNRSHTLDDVEENPLIPSINIRSPSSSSATSTSKDR
ILQDWTNKFKRNDNCNLPNIIIEDHAEDDFHDVLEHSDEISVIRANAKEA
IKQQQNEVISNLQKRSKDEAKSDIFMNIACLTTGDIFNFSSFMEMDKDSY
DEDETSLISLGCKVVQIRRDSFFYLINSRNLYMAKEIAELSRYPNNEQLV
EKYRINQSWKTYRQKLVHDVIKKKEVKNHIKHSSKCQCLETKRKKDHFQR
HNYPVLPPLIDNDTPSRKPSFNHQGLTVKTEDYRRGSLTVNILNNAYGDQ
Q

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_033513	XLOC_033513	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00053058	TCONS_00053058	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000595	cNMP-bd_dom
IPR014710	RmlC-like_jellyroll
IPR018488	cNMP-bd_CS
IPR018490	cNMP-bd-like

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000595	Cyclic nucleotide-binding domain	SMART	SM00100	cnmp_10	coord: 268..399 e-value: 0.0027 score: 26.9
IPR000595	Cyclic nucleotide-binding domain	PFAM	PF00027	cNMP_binding	coord: 292..381 e-value: 2.4E-12 score: 46.6
IPR000595	Cyclic nucleotide-binding domain	PROSITE	PS50042	CNMP_BINDING_3	coord: 268..380 score: 20.264
IPR014710	RmlC-like jelly roll fold	GENE3D	2.60.120.10		coord: 253..388 e-value: 2.4E-20 score: 72.1
IPR014710	RmlC-like jelly roll fold	GENE3D	2.60.120.10		coord: 389..637 e-value: 1.0E-9 score: 37.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 479..498
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..28
None	No IPR available	CDD	cd00038	CAP_ED	coord: 284..381 e-value: 6.18635E-15 score: 71.203
IPR018488	Cyclic nucleotide-binding, conserved site	PROSITE	PS00889	CNMP_BINDING_2	coord: 345..363
IPR018490	Cyclic nucleotide-binding-like	SUPERFAMILY	51206	cAMP-binding domain-like	coord: 578..629 coord: 388..462
IPR018490	Cyclic nucleotide-binding-like	SUPERFAMILY	51206	cAMP-binding domain-like	coord: 274..383

Blast

[Close]

BLAST of TCONS_00053058-protein vs. Swiss-Prot (Human)
Match: CNBD2 (Cyclic nucleotide-binding domain-containing protein 2 OS=Homo sapiens GN=CNBD2 PE=2 SV=2)

HSP 1 Score: 104.375 bits (259), Expect = 3.503e-23
Identity = 97/466 (20.82%), Postives = 218/466 (46.78%), Query Frame = 0

Query:  221 IPFNREDFTKNAEHVGCEVPTWAKEVLRREGPSRTVNDVYGLLRMLSILKKFNEKFTYSVRAVMCRMFTYSKVPRKRIVLREGHIGHDFYLIYTGSVFVNKQ--VFNKFTQKNEWKTVNVLRRGDSFGELALLQLNSFRSATIVTRDDTEFLIVPR-DVFSNVCPKALDAELNIKIDLIKETRVFQTWSEESLQALCLDSRVNQYPTNSVIVGNSKRNEEWLFMCLEGKCMAVKRLKFDPKDYATTPCNRS---HTLDDVEENPLIPSINIRSPSSSSATSTSKDRILQDWTNKFKRNDNCNLPNIIIEDHAED-DFHDVLEHSDEI------SVIRANAKEAIKQQQNEVISNLQKRSKDEAKSDIFMNIACLTTGDIFNFSSFMEMDKDSYDEDETSLISLGCKVVQIRRDSFFYLINSRNLYMAKEIAELS-RYPNNEQLVEKYRINQSWKTYRQKLVHDVIK 672
            + F+  DF     H     P  A ++++++   RT +++  +  +L +L  +   +   ++ ++ ++  + +  R+R+++++G  G+ FY IY G+V + K     + F   +      +L +G  FGE+ +L   S R +TIV  ++TEFL+V R D F+N   + +  +   + +  ++  +F +WS+E L  L   +++ ++    +I  +   +   +F+  +G C  ++ L     D   +P  R      L+ ++  PL   ++  SP         K   LQD++       +  LP++      +   F   +  S +         I++   ++IK     +I+        EA    ++ +  +  G+I        + +   D     L+SLG ++++IR++ F+ LI++ +  M K++ +L+  +P++E + +K+    SW  +R+ L+  +++
Sbjct:   70 VTFDTMDFIAEEGHF----PPKAIQIMQKKPSWRTEDEIQAVCNILQVLDSYRN-YAEPLQLLLAKVMRFERFGRRRVIIKKGQKGNSFYFIYLGTVAITKDEDGSSAFLDPHP----KLLHKGSCFGEMDVLH-ASVRRSTIVCMEETEFLVVDREDFFANKLDQEVQKDAQYRFEFFRKMELFASWSDEKLWQLVAMAKIERFSYGQLISKDFGESPFIMFIS-KGSCEVLRLL-----DLGASPSYRRWIWQHLELIDGRPLKTHLSEYSPMERFKEFQIKSYPLQDFS-------SLKLPHLKKAWGLQGTSFSRKIRTSGDTLPKMLGPKIQSRPAQSIK---CAMINIKPGELPKEAAVGAYVKVHTVEQGEILGLHQAF-LPEGECDTRPLILMSLGNELIRIRKEIFYELIDNDD-EMIKKLLKLNIAFPSDEDMCQKFLQQNSWNIFRKDLLQLLVE 507

The following BLAST results are available for this feature:

BLAST of TCONS_00053058-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00053058-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
CNBD2	3.503e-23	20.82	Cyclic nucleotide-binding domain-containing protei...	[more]

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TCONS_00053058-protein (polypeptide) - C. hemisphaerica