TCONS_00053346-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00053346-protein
Unique NameTCONS_00053346-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length302

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00053346-protein ID=TCONS_00053346-protein|Name=TCONS_00053346-protein|organism=Clytia hemisphaerica|type=polypeptide|length=302bp
MTSAIPRSPSSDALVDERLMKFGWYHGVASRDDSMKHLDGKSPGLYLVRK
RKGTTGEYVLSVSEIQKVCHYIIQDVNGMYFKIGEQRFADIPSIIEFYKK
HMLDTTNLIEPALRPGAALDPKLGSSTTNNTSSTSNDIVKVKAKFSFPGK
DLEDLPFKKGDFLTIIRKEEDQWWLARDNTGREGMIPVPYVEVVNTTPTP
TRSPSAKSQKGSFKKINNNNYAKPKEIAAAQPQIPENHKGPIYATALINR
EPNVYDEKLLGFKKGDIVEVLKTNDDGLWEGRHTATLKVGYFPFTHVKLN
LE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_033662XLOC_033662Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00053346TCONS_00053346Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001452SH3_domain
IPR000980SH2
IPR011511SH3_2
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001452SH3 domainPRINTSPR00452SH3DOMAINcoord: 153..168
score: 37.4
coord: 170..179
score: 32.45
coord: 182..194
score: 38.1
IPR001452SH3 domainSMARTSM00326SH3_2coord: 139..195
e-value: 2.5E-17
score: 73.6
coord: 242..301
e-value: 1.0E-8
score: 44.9
IPR001452SH3 domainPFAMPF00018SH3_1coord: 142..188
e-value: 1.5E-14
score: 53.2
IPR001452SH3 domainPROSITEPS50002SH3coord: 239..302
score: 10.338
IPR001452SH3 domainPROSITEPS50002SH3coord: 136..196
score: 16.135
IPR001452SH3 domainSUPERFAMILY50044SH3-domaincoord: 137..217
IPR001452SH3 domainSUPERFAMILY50044SH3-domaincoord: 224..300
IPR000980SH2 domainPRINTSPR00401SH2DOMAINcoord: 24..38
score: 36.21
coord: 55..66
score: 38.89
coord: 43..53
score: 34.57
coord: 87..101
score: 21.81
coord: 67..77
score: 35.19
IPR000980SH2 domainSMARTSM00252SH2_5coord: 22..104
e-value: 3.1E-19
score: 79.9
IPR000980SH2 domainGENE3D3.30.505.10coord: 14..133
e-value: 8.2E-21
score: 73.4
IPR000980SH2 domainPFAMPF00017SH2coord: 24..98
e-value: 4.7E-16
score: 58.6
IPR000980SH2 domainPROSITEPS50001SH2coord: 24..112
score: 16.055
IPR000980SH2 domainSUPERFAMILY55550SH2 domaincoord: 165..191
coord: 19..114
IPR011511Variant SH3 domainPFAMPF07653SH3_2coord: 255..298
e-value: 2.6E-8
score: 33.3
NoneNo IPR availableGENE3D2.30.30.40coord: 242..300
e-value: 5.6E-12
score: 44.6
NoneNo IPR availableGENE3D2.30.30.40coord: 134..165
e-value: 3.0E-11
score: 42.1
NoneNo IPR availableGENE3D2.30.30.40coord: 166..241
e-value: 1.8E-13
score: 49.3

Blast
[Close]
BLAST of TCONS_00053346-protein vs. Swiss-Prot (Human)
Match: CRKL (Crk-like protein OS=Homo sapiens GN=CRKL PE=1 SV=1)

HSP 1 Score: 224.557 bits (571), Expect = 3.402e-72
Identity = 124/299 (41.47%), Postives = 166/299 (55.52%), Query Frame = 0 
Query:   21 KFGWYHGVASRDDSMKHLDGKSPGLYLVRKRKGTTGEYVLSVSEIQKVCHYIIQDVNGMYFKIGEQRFADIPSIIEFYKKHMLDTTNLIEPALRPGAALDPKLGSSTTNNTSSTSNDIVKVKAKFSFPGKDLEDLPFKKGDFLTIIRKEEDQWWLARDNTGREGMIPVPYVE-VVNTTPTPTRSPSAKSQKGSFKKINNNNYAKPKEIAA-AQPQ------------------IPENHKGPIYATALINREPNVYDEKLLGFKKGDIVEVLKTNDDGLWEGRHTATLKVGYFPFTHVKL 299
            +  WY G  SR ++   L G+  G++LVR      G+YVLSVSE  +V HYII  +    FKIG+Q F  +P+++EFYK H LDTT LIEPA R      P +GS +  N  +  +++  V+  + FPG D EDLPFKKG+ L II K E+QWW AR+  GR GMIPVPYVE +V ++P            G     N+N+Y  P+   A AQPQ                  +P    GP++A A+  R P  YD+  L  + GDIV+V + N +G WEG      + G FPFTHVK+
Sbjct:   11 RSAWYMGPVSRQEAQTRLQGQRHGMFLVRDSSTCPGDYVLSVSENSRVSHYIINSLPNRRFKIGDQEFDHLPALLEFYKIHYLDTTTLIEPAPR---YPSPPMGSVSAPNLPTAEDNLEYVRTLYDFPGNDAEDLPFKKGEILVIIEKPEEQWWSARNKDGRVGMIPVPYVEKLVRSSP-----------HGKHGNRNSNSYGIPEPAHAYAQPQTTTPLPAVSGSPGAAITPLPSTQNGPVFAKAIQKRVPCAYDKTALALEVGDIVKVTRMNINGQWEGEVNG--RKGLFPFTHVKI 293
The following BLAST results are available for this feature:
BLAST of TCONS_00053346-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CRKL3.402e-7241.47Crk-like protein OS=Homo sapiens GN=CRKL PE=1 SV=1[more]
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