TCONS_00053348-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00053348-protein
Unique NameTCONS_00053348-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length515

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00053348-protein ID=TCONS_00053348-protein|Name=TCONS_00053348-protein|organism=Clytia hemisphaerica|type=polypeptide|length=515bp
MEKLPWLLVLCFGCLSVFNFLRYLEVDSRFNRLELENWSKDVVKDRSRRD
APKMLDENVQNILSSIETLTDFVQKQSNETFNGEINQALEKFFMQFPTKN
ICKQFVTQCGCKEKCTTIDKDSSDVKSTAKFIRGPPGPPGPRGLSLEPPR
LIKSSLDDRIVNLTDSTTFECSFSGNPLPEISWKSSAKNAKTITWKNKEN
LEVSSRMIISNISWSDQGPIECRAKSLLGEVSVSGNLHTLSHPVINTTKA
LVFAPQGVDFHFPLCQVRSNPPAKITWKRIFWSLPAGRFHIREKELLIKD
VRYSDEGFYVCEAENMLGKAQMTVQLKIRSLELQSSSPSFIQTTKNVTSI
ECSAYGNTRIMTGTITRSGMPIPSVSESIKANLLNVKAVVSENGTYLCTV
RSGSEKVNSATVVKILPPEKTEKTNLNPETSLPSIIALAGDVVNISCFAY
GNTQYMNGTITNADVPVQNVTIITKDDLFLVKALVVDDGTFVCTIRNETD
DKVIVENISRVIFLP
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_033663XLOC_033663Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00053348TCONS_00053348Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003598Ig_sub2
IPR003599Ig_sub
IPR013783Ig-like_fold
IPR013098Ig_I-set
IPR007110Ig-like_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003598Immunoglobulin subtype 2SMARTSM00408igc2_5coord: 162..229
e-value: 0.045
score: 20.1
coord: 255..318
e-value: 0.0031
score: 26.7
IPR003599Immunoglobulin subtypeSMARTSM00409IG_3ccoord: 432..514
e-value: 2.8
score: 16.3
coord: 249..329
e-value: 0.0032
score: 26.7
coord: 156..240
e-value: 0.0021
score: 27.3
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 344..424
e-value: 0.0033
score: 17.0
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 152..266
e-value: 8.1E-16
score: 57.7
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 267..343
e-value: 3.4E-12
score: 45.7
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 425..509
e-value: 0.041
score: 13.4
IPR013098Immunoglobulin I-setPFAMPF07679I-setcoord: 258..328
e-value: 1.1E-8
score: 34.9
coord: 154..237
e-value: 1.3E-10
score: 41.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 126..148
NoneNo IPR availableCDDcd00096Igcoord: 168..234
e-value: 1.53049E-7
score: 47.8691
IPR007110Immunoglobulin-like domainPROSITEPS50835IG_LIKEcoord: 243..329
score: 9.246
IPR007110Immunoglobulin-like domainPROSITEPS50835IG_LIKEcoord: 149..234
score: 10.299
IPR007110Immunoglobulin-like domainSUPERFAMILY48726Immunoglobulincoord: 265..329
IPR007110Immunoglobulin-like domainSUPERFAMILY48726Immunoglobulincoord: 147..237

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00053348-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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