TCONS_00053515-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00053515-protein
Unique NameTCONS_00053515-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length140

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00053515-protein ID=TCONS_00053515-protein|Name=TCONS_00053515-protein|organism=Clytia hemisphaerica|type=polypeptide|length=140bp
MATAAGLLSDFKSLTEQAISAADEFSQIYYKLYDTQRHRLIQLYNDRSTV
VWNGNAVNGTQAINEFFINLPATEHQIFSMDSQPINKIATQGQTAILVTF
DGQVKFENERDYQYFTQTLLLMSVNNTWKIINDCLRFIDS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_033783XLOC_033783Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00053515TCONS_00053515Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002075NTF2
IPR018222Nuclear_transport_factor_2_euk
IPR032710NTF2-like_dom
Vocabulary: Biological Process
TermDefinition
GO:0006810transport
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006810 transport
cellular_component GO:0005622 intracellular
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002075Nuclear transport factor 2PFAMPF02136NTF2coord: 22..137
e-value: 1.1E-25
score: 90.4
NoneNo IPR availableGENE3D3.10.450.50coord: 5..139
e-value: 5.5E-34
score: 116.4
IPR018222Nuclear transport factor 2, eukaryotePROSITEPS50177NTF2_DOMAINcoord: 21..137
score: 24.445
IPR018222Nuclear transport factor 2, eukaryoteCDDcd00780NTF2coord: 17..139
e-value: 8.21846E-28
score: 99.6645
IPR032710NTF2-like domainSUPERFAMILY54427NTF2-likecoord: 11..139

Blast
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BLAST of TCONS_00053515-protein vs. Swiss-Prot (Human)
Match: NXT2 (NTF2-related export protein 2 OS=Homo sapiens GN=NXT2 PE=1 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 4.150e-38
Identity = 63/134 (47.01%), Postives = 89/134 (66.42%), Query Frame = 0 
Query:   10 DFKSLTEQAISAADEFSQIYYKLYDTQRHRLIQLYNDRSTVVWNGNAVNGTQAINEFFINLPATEHQIFSMDSQPINKIATQGQTAILVTFDGQVKFENERDYQYFTQTLLLM---SVNNT-WKIINDCLRFID 139
            DFK+  +QA  AA+EF  IYY+  D +R  L +LY D++T++WNGNAV+G  A+N FF  LP++E Q+  +D QP+++ ATQ QT +LV   G VKF+  + + +F Q  LL    + NNT WKI +DC RF D
Sbjct:    6 DFKTYVDQACRAAEEFVNIYYETMDKRRRALTRLYLDKATLIWNGNAVSGLDALNNFFDTLPSSEFQVNMLDCQPVHEQATQSQTTVLVVTSGTVKFDGNKQH-FFNQNFLLTAQSTPNNTVWKIASDCFRFQD 138
The following BLAST results are available for this feature:
BLAST of TCONS_00053515-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
NXT24.150e-3847.01NTF2-related export protein 2 OS=Homo sapiens GN=N... [more]
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