TCONS_00053604-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00053604-protein
Unique Name	TCONS_00053604-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	326

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00053604-protein ID=TCONS_00053604-protein|Name=TCONS_00053604-protein|organism=Clytia hemisphaerica|type=polypeptide|length=326bp
MTNEKVTAVPIEDEKVKEWVEHMYSIGEDELRMIKPYNQVLRKRYMEIHD
DIQNFQTREDDVFICTAPKSGTRWMQEVMWCLRNDCDFEKANKVPLDFRT
PYIDAKAVAPDGTFTENLVEKISKMEGPRSIKTHLSYDMLPKSLREDQIG
KIVSVIRNPRDICASFCHHFKLTDKYTGGVELLADVYMRDVGLFYGPHFT
NVLSYWSRREQDNILIVSYEEMKKDLASVIRKIADFLGKEITDEDVAKIV
DFTNIENMKKNPMSNLEERINMIKRSQNNTEEKGTFINKGKTGGWKTAFT
QETIQRFEEWEKKHLEGTGLAFIYEL

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_033823	XLOC_033823	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00053604	TCONS_00053604	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000863	Sulfotransferase_dom
IPR027417	P-loop_NTPase

Vocabulary: **Molecular Function**
Term	Definition
GO:0008146	sulfotransferase activity

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0008146	sulfotransferase activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 263..283
None	No IPR available	GENE3D	3.40.50.300		coord: 2..326 e-value: 8.7E-66 score: 221.8
IPR000863	Sulfotransferase domain	PFAM	PF00685	Sulfotransfer_1	coord: 60..319 e-value: 5.1E-58 score: 196.6
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 36..325

Blast

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BLAST of TCONS_00053604-protein vs. Swiss-Prot (Human)
Match: ST1C2 (Sulfotransferase 1C2 OS=Homo sapiens GN=SULT1C2 PE=1 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 6.926e-45
Identity = 94/278 (33.81%), Postives = 152/278 (54.68%), Query Frame = 0

Query:   52 IQNFQTREDDVFICTAPKSGTRWMQEVMWCLRNDCDFEKANKVPLDFRTPYID-AKAVAPDGTFTENLVEKISKMEGPRSIKTHLSYDMLPKSLREDQIGKIVSVIRNPRDICASFCHHFKLTDKYT--GGVELLADVYMRDVGLFYGPHFTNVLSYWSRREQDNILIVSYEEMKKDLASVIRKIADFLGKEITDEDVAKIVDFTNIENMKKNPMSNLEERINMIKRSQNNTEEKGTFINKGKTGGWKTAFTQETIQRFEEWEKKHLEGTGLAFIYEL 326
            IQ+F+ + DD+ ICT PK+GT W+QE++  +  + D EK  +  +  R P+I+ A+   P G      VEK   M  PR +KTHLS  +LP S  E+   K + V RN +D   S+ H  ++       G  E   + ++ +  + +G  F +V  +W  +++  IL + YE++K+D    IRK+  F+GK++ +  + KIV  T+ E MK+NPM+N   R  + K   + +    +F+ KG  G WK  FT    +RF+E  ++ +EGT + F  EL
Sbjct:   32 IQSFEAKPDDLLICTYPKAGTTWIQEIVDMIEQNGDVEKCQRAIIQHRHPFIEWARPPQPSG------VEKAKAMPSPRILKTHLSTQLLPPSFWENNC-KFLYVARNAKDCMVSYYHFQRMNHMLPDPGTWEEYFETFI-NGKVVWGSWFDHVKGWWEMKDRHQILFLFYEDIKRDPKHEIRKVMQFMGKKVDETVLDKIVQETSFEKMKENPMTN---RSTVSKSILDQS--ISSFMRKGTVGDWKNHFTVAQNERFDEIYRRKMEGTSINFCMEL 296

The following BLAST results are available for this feature:

BLAST of TCONS_00053604-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00053604-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
ST1C2	6.926e-45	33.81	Sulfotransferase 1C2 OS=Homo sapiens GN=SULT1C2 PE...	[more]

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TCONS_00053604-protein (polypeptide) - C. hemisphaerica