TCONS_00054052-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00054052-protein
Unique NameTCONS_00054052-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length261

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00054052-protein ID=TCONS_00054052-protein|Name=TCONS_00054052-protein|organism=Clytia hemisphaerica|type=polypeptide|length=261bp
MIIIINLLLLSLAQSFVNGSSRTVTAKEDGDAVLEWDISRYTSADKFEIY
YNKDTNLATIQQSGAAQVADGGTNKYGKRLQVGKVGDRLRITIKKFRSSD
AGTYEVDVDMGRGKPSQVLQKLILESEDSPNSSYLGSGISSSTGIIIGVV
VGIVVLAILIALCCYCYRKNRDPDDPESGTRLAAFNTGRPERNEPADEAQ
IPLEQSEYQTPSGIPINKPPVAKKPPVPPRAVYSELGEGGGRTGPPDLKP
TRSQYAEARDT
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_034120XLOC_034120Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00054052TCONS_00054052Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013783Ig-like_fold
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.5.510coord: 125..171
e-value: 2.6E-12
score: 45.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 173..261
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 11..124
e-value: 2.9E-7
score: 30.0

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00054052-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top