TCONS_00054073-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00054073-protein
Unique NameTCONS_00054073-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length185

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00054073-protein ID=TCONS_00054073-protein|Name=TCONS_00054073-protein|organism=Clytia hemisphaerica|type=polypeptide|length=185bp
DHEKLSNLEEIMNVKQSTTDNVVLHSVDGTLTTKGESLYRVIDGLADEKL
FVKDVDGKDEGKIIEKEKAETGNLKAAVISHYVRTLGIIATTILLLSAIL
QEAFRIASRVWLAHWSSLPLQTSKTSRNLFLRLYALLGFIQAFFVLLLAL
VLAIASYKSSKKLHSELLDTIMHCPMAFFEATPIG
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_034124XLOC_034124Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00054073TCONS_00054073Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011527ABC1_TM_dom
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
GO:0006810transport
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0042626ATPase activity, coupled to transmembrane movement of substances
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055085 transmembrane transport
biological_process GO:0006810 transport
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0042626 ATPase activity, coupled to transmembrane movement of substances
molecular_function GO:0005524 ATP binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.1560.10coord: 52..185
e-value: 2.2E-17
score: 62.3
IPR011527ABC transporter type 1, transmembrane domainPFAMPF00664ABC_membranecoord: 92..185
e-value: 1.1E-10
score: 41.6
IPR011527ABC transporter type 1, transmembrane domainPROSITEPS50929ABC_TM1Fcoord: 93..185
score: 10.568
IPR011527ABC transporter type 1, transmembrane domainSUPERFAMILY90123ABC transporter transmembrane regioncoord: 93..185

Blast
[Close]
BLAST of TCONS_00054073-protein vs. Swiss-Prot (Human)
Match: MRP3 (Canalicular multispecific organic anion transporter 2 OS=Homo sapiens GN=ABCC3 PE=1 SV=3)

HSP 1 Score: 74.7146 bits (182), Expect = 5.996e-16
Identity = 42/135 (31.11%), Postives = 76/135 (56.30%), Query Frame = 0 
Query:   52 VKDVDGKDEGKIIEKEKAETGNLKAAVISHYVRTLGIIATTILLLSAILQEAFRIASRVWLAHWSSLPLQTSKTSR-NLFLRLYALLGFIQAFFVLLLALVLAIASYKSSKKLHSELLDTIMHCPMAFFEATPIG 185
            V+  + K +G + ++EKA  G ++ +V   Y + +G+  T  + L  + Q A  I + VWL+ W++  +  S+ +  +L L +YA LG +Q F V+L A+ +A    ++++ LH  LL   +  P +FF+ TP G
Sbjct:  932 VQVTEAKADGALTQEEKAAIGTVELSVFWDYAKAVGLCTTLAICLLYVGQSAAAIGANVWLSAWTNDAMADSRQNNTSLRLGVYAALGILQGFLVMLAAMAMAAGGIQAARVLHQALLHNKIRSPQSFFDTTPSG 1066
The following BLAST results are available for this feature:
BLAST of TCONS_00054073-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MRP35.996e-1631.11Canalicular multispecific organic anion transporte... [more]
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