TCONS_00054219-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00054219-protein
Unique NameTCONS_00054219-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length263

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00054219-protein ID=TCONS_00054219-protein|Name=TCONS_00054219-protein|organism=Clytia hemisphaerica|type=polypeptide|length=263bp
MALRLKRVPVTNYRHLCRCLSTSGSVNSNVEHHRFAVIGGGAGGLSVASY
LARKFPNQVAVIEPADYHYYQPMWTLVGAGLKDLDDSMKSMSLVMPRNVK
WIKEKAVKFDPKENLVHTDNDRQIKYDFAVVALGIQLQFEKLPGLTEALG
TDGVGCNYSVNTVKDTFKGLQKFNGGEAIFTLPATPVKCLGAPQKIMYLA
DEIFRKNGCRDQTNISYKTPAGVLFGVEKYRNSLLKVCAERDINVDLFRH
LIQIDPSRKEVXR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_034198XLOC_034198Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00054219TCONS_00054219Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023753FAD/NAD-binding_dom
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
molecular_function GO:0016491 oxidoreductase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.720coord: 28..153
e-value: 1.9E-11
score: 43.2
IPR023753FAD/NAD(P)-binding domainPFAMPF07992Pyr_redox_2coord: 34..147
e-value: 5.7E-10
score: 38.8
IPR023753FAD/NAD(P)-binding domainGENE3D3.50.50.60coord: 154..263
e-value: 2.0E-26
score: 92.2
IPR023753FAD/NAD(P)-binding domainSUPERFAMILY51905FAD/NAD(P)-binding domaincoord: 144..261
IPR023753FAD/NAD(P)-binding domainSUPERFAMILY51905FAD/NAD(P)-binding domaincoord: 32..165

Blast
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BLAST of TCONS_00054219-protein vs. Swiss-Prot (Human)
Match: SQOR (Sulfide:::quinone oxidoreductase, mitochondrial OS=Homo sapiens GN=SQOR PE=1 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 1.659e-70
Identity = 107/239 (44.77%), Postives = 163/239 (68.20%), Query Frame = 0 
Query:   23 SGSVNSNVEHHRFAVIGGGAGGLSVASYLARKF-PNQVAVIEPADYHYYQPMWTLVGAGLKDLDDSMKSMSLVMPRNVKWIKEKAVKFDPKENLVHTDNDRQIKYDFAVVALGIQLQFEKLPGLTEALGTDGVGCNYSVNTVKDTFKGLQKFNGGEAIFTLPATPVKCLGAPQKIMYLADEIFRKNGCRDQTNISYKTPAGVLFGVEKYRNSLLKVCAERDINVDLFRHLIQIDPSRKE 260
            +G+ ++   H+   V+GGG+GG+++A+ + RK     VA++EP++ H+YQP+WTLVGAG K L  S +  + V+P  V+WIK +  + +P +N +HTD+D +I Y + ++ALGIQL +EK+ GL E      +G NYSV TV+ T+K LQ F  G AIFT P TPVKC GAPQKIMYL++  FRK G R + NI + T  G +FGV+KY ++L ++  ER++ V+  ++LI++   ++E
Sbjct:   34 TGASHAARNHYEVLVLGGGSGGITMAARMKRKVGAENVAIVEPSERHFYQPIWTLVGAGAKQLSSSGRPTASVIPSGVEWIKARVTELNPDKNCIHTDDDEKISYRYLIIALGIQLDYEKIKGLPEGFAHPKIGSNYSVKTVEKTWKALQDFKEGNAIFTFPNTPVKCAGAPQKIMYLSEAYFRKTGKRSKANIIFNTSLGAIFGVKKYADALQEIIQERNLTVNYKKNLIEVRADKQE 272
The following BLAST results are available for this feature:
BLAST of TCONS_00054219-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SQOR1.659e-7044.77Sulfide:::quinone oxidoreductase, mitochondrial OS... [more]
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