TCONS_00054242-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00054242-protein
Unique NameTCONS_00054242-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length381

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00054242-protein ID=TCONS_00054242-protein|Name=TCONS_00054242-protein|organism=Clytia hemisphaerica|type=polypeptide|length=381bp
MSLTYKGPKSFITPDDARTLGMQQCKTIYCDYYFSLDSEVTLSNPKTLQL
LIEQNRTFITPILSQRGKLFSNFWGAIENNGYYARAPDYLSIVRGERVGV
WNSPYVTSCYLIRREKLSDMVHDPFYAPGEDFDMIFAANNRKKGIFMYAT
NIHEFGHLKKTDTYSTTKKNGDLYQLFDNQWDWERNYLHKDYHRYLKPNI
KKIEPCPDVYTFPFVNERWTKQIIQECEAFGKWSDGKKKDKRVAGGYENV
PTVDIHMNQIGYEKHWLQMLKLYIKRIVENFYTGYRPKCVANMNFVVKYI
TEGQNSLPAHHDTSTFTINLALNNQKTDYEGGGVRFTRYNCSVKGAKVGW
ALIHPGRLTHQHEGLPTTKGVRYVMISFVDP
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_034215XLOC_034215Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00054242TCONS_00054242Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006620Pro_4_hyd_alph
IPR005123Oxoglu/Fe-dep_dioxygenase
IPR029044Nucleotide-diphossugar_trans
Vocabulary: Molecular Function
TermDefinition
GO:0005506iron ion binding
GO:0031418L-ascorbic acid binding
GO:0016705oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0016491oxidoreductase activity
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
molecular_function GO:0005506 iron ion binding
molecular_function GO:0031418 L-ascorbic acid binding
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006620Prolyl 4-hydroxylase, alpha subunitSMARTSM00702p4hccoord: 207..380
e-value: 9.9E-13
score: 58.3
NoneNo IPR availableGENE3D2.60.120.620coord: 207..380
e-value: 2.0E-14
score: 53.4
IPR005123Oxoglutarate/iron-dependent dioxygenasePROSITEPS51471FE2OG_OXYcoord: 290..381
score: 10.876
IPR029044Nucleotide-diphospho-sugar transferasesSUPERFAMILY53448Nucleotide-diphospho-sugar transferasescoord: 17..201

Blast
[Close]
BLAST of TCONS_00054242-protein vs. Swiss-Prot (Human)
Match: PLOD3 (Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3 OS=Homo sapiens GN=PLOD3 PE=1 SV=1)

HSP 1 Score: 412.535 bits (1059), Expect = 8.400e-139
Identity = 190/378 (50.26%), Postives = 264/378 (69.84%), Query Frame = 0 
Query:    7 GPKSFITPDDARTLGMQQCKT-IYCDYYFSLDSEVTLSNPKTLQLLIEQNRTFITPILSQRGKLFSNFWGAIENNGYYARAPDYLSIVRGERVGVWNSPYVTSCYLIRREKLSDMV--HDPFYAPGEDFDMIFAANNRKKGIFMYATNIHEFGHLKKTDTYSTTKKNGDLYQLFDNQWDWERNYLHKDYHRYLKPNIKKIEPCPDVYTFPFVNERWTKQIIQECEAFGKWSDGKKKDKRVAGGYENVPTVDIHMNQIGYEKHWLQMLKLYIKRIVENFYTGYRPKCVANMNFVVKYITEGQNSLPAHHDTSTFTINLALNNQKTDYEGGGVRFTRYNCSVKGAKVGWALIHPGRLTHQHEGLPTTKGVRYVMISFVDP 381
            GP+  ++P +AR + M  C+    C++YFSLD++  L+N +TL++LIE+NR  I P+LS+ GKL+SNFWGA+  + YYAR+ DY+ +V+ +RVGVWN PY++  Y+IR + L   +   D F     D DM F  + R KGIF++ +N HEFG L  T  Y T   + DL+Q+FDN  DW+  Y+H++Y R L+      +PCPDVY FP ++E+   +++ E E +G+WS G+ +D R+AGGYENVPTVDIHM Q+GYE  WLQ+L+ Y+  + E+ + GY  K  A MNFVV+Y  + Q SL  HHD+STFT+N+ALN++  DYEGGG RF RY+C +   + GWAL+HPGRLTH HEGLPTT G RY+M+SFVDP
Sbjct:  361 GPEEALSPGEARDMAMDLCRQDPECEFYFSLDADAVLTNLQTLRILIEENRKVIAPMLSRHGKLWSNFWGALSPDEYYARSEDYVELVQRKRVGVWNVPYISQAYVIRGDTLRMELPQRDVFSGSDTDPDMAFCKSFRDKGIFLHLSNQHEFGRLLATSRYDTEHLHPDLWQIFDNPVDWKEQYIHENYSRALEGEGIVEQPCPDVYWFPLLSEQMCDELVAEMEHYGQWSGGRHEDSRLAGGYENVPTVDIHMKQVGYEDQWLQLLRTYVGPMTESLFPGYHTKARAVMNFVVRYRPDEQPSLRPHHDSSTFTLNVALNHKGLDYEGGGCRFLRYDCVISSPRKGWALLHPGRLTHYHEGLPTTWGTRYIMVSFVDP 738
The following BLAST results are available for this feature:
BLAST of TCONS_00054242-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PLOD38.400e-13950.26Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3 ... [more]
back to top