TCONS_00054281-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00054281-protein
Unique NameTCONS_00054281-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length208

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00054281-protein ID=TCONS_00054281-protein|Name=TCONS_00054281-protein|organism=Clytia hemisphaerica|type=polypeptide|length=208bp
MQHSKTLNIIAGLGNHFAKHSRHSVGMRICDSLAKKHNLSWSYERKYKAF
TTALSVQDHQFILFKSKWPMNLNGRSLEKIVSDLSVDINKVTVLHDELDR
NLGKCRWKLEGSANGHNGVKSVIQSLKTDKFRRLRIGIGRPINKSDVVDY
VLSDFTAAEEQEFFEVATRCIEMLRMDVFPDEVVEVGQKEARIVVEGDGD
KDDTIKDS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_034236XLOC_034236Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00054281TCONS_00054281Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001328Pept_tRNA_hydro
IPR018171Pept_tRNA_hydro_CS
Vocabulary: Molecular Function
TermDefinition
GO:0004045aminoacyl-tRNA hydrolase activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0004045 aminoacyl-tRNA hydrolase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001328Peptidyl-tRNA hydrolaseGENE3D3.40.50.1470coord: 1..188
e-value: 5.3E-54
score: 182.1
IPR001328Peptidyl-tRNA hydrolasePFAMPF01195Pept_tRNA_hydrocoord: 9..174
e-value: 7.7E-40
score: 136.5
IPR001328Peptidyl-tRNA hydrolaseTIGRFAMTIGR00447TIGR00447coord: 8..176
e-value: 5.7E-44
score: 148.0
IPR001328Peptidyl-tRNA hydrolaseCDDcd00462PTHcoord: 9..175
e-value: 2.29696E-57
score: 179.978
IPR001328Peptidyl-tRNA hydrolaseSUPERFAMILY53178Peptidyl-tRNA hydrolase-likecoord: 8..178
IPR018171Peptidyl-tRNA hydrolase, conserved sitePROSITEPS01196PEPT_TRNA_HYDROL_2coord: 112..122

Blast
[Close]
BLAST of TCONS_00054281-protein vs. Swiss-Prot (Human)
Match: PTH (Probable peptidyl-tRNA hydrolase OS=Homo sapiens GN=PTRH1 PE=1 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 8.605e-35
Identity = 62/168 (36.90%), Postives = 96/168 (57.14%), Query Frame = 0 
Query:    9 IIAGLGNHFAKHSRHSVGMRICDSLAKKHNL--SWSYERKYKAFTTALSVQDHQFILFKSKWPMNLNGRSLEKIVSDLSVDINKVTVLHDELDRNLGKCRWKLEGSANGHNGVKSVIQSLKTDKFRRLRIGIGRPINKSDVVDYVLSDFTAAEEQEFFEVATRCIEML 174
            ++AGLGN     +RHSVGM +   LA++  +  SW+ +R   A      + D Q +L + +  MN NGRS+ +      +   +V ++HDELD+ LG+   KL GSA GHNGV+S I  L ++   RLR+GIGRP +   V  +VL  F+ AE++    +  R  +++
Sbjct:   32 MVAGLGNPGLPGTRHSVGMAVLGQLARRLGVAESWTRDRHCAADLALAPLGDAQLVLLRPRRLMNANGRSVARAAELFGLTAEEVYLVHDELDKPLGRLALKLGGSARGHNGVRSCISCLNSNAMPRLRVGIGRPAHPEAVQAHVLGCFSPAEQELLPLLLDRATDLI 199
The following BLAST results are available for this feature:
BLAST of TCONS_00054281-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PTH8.605e-3536.90Probable peptidyl-tRNA hydrolase OS=Homo sapiens G... [more]
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