TCONS_00054322-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00054322-protein
Unique NameTCONS_00054322-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2099

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00054322-protein ID=TCONS_00054322-protein|Name=TCONS_00054322-protein|organism=Clytia hemisphaerica|type=polypeptide|length=2099bp
MMKYLIAQCLFLIFSFLVLANASLIPGGAHVCHRAVSYNVNQPRRLTRVG
YSSYRTCCKRVWGACIRRCRRYRTHQVVYYQNYLIKRYKSEYYCCPGWAR
SGRQCTIPICNPGCINGKCAQPNVCQCKAGFVGRRCETDVNECVTKKPCS
QTCSNLPGTFSCSCNKGFIKAKPNSPIDGTCLDVDECSSVKPCKCAVSSP
GCSAKCSNTIGSFSCSCNKGFELKYNGQICADVNECERAKARKNKICHHN
CINSIGNYYCTCNKGFHLDRDQKTCKDTNECSTLNGGCNQICRNKVGSYG
CLCNHGYRLSIANQKTCLDINECLEQKPCDEKHGICTNLLGTFRCSCKTG
YYLMPDKKTCRDRDECARISTNGCQQICYNTVGSYTCSCTNGFRLNEDGR
KCGDIDECSVKADNCQHFCHNTIGLFTCSCKPGFKLNKDGHTCQALPCVE
ITSLLNGKVMCSGHVTNDVCKFDCDEGYNLIGSKERTCTHTSTWSGEETV
CNAKRCPPFQFPNHGSIIQPCYEKFGAVCVKRCQEGFYQTGESISECKIE
NGILYWTPDNVTCHENKPCLPNPCFHGTTCYNTKDDKGFICDCSNTSYEG
DKCQFIKIKIDSFPEMEINKNTDPIRFYARPDNDITIKLKSDNGAISFDP
PVFTISHPANQSTFTMRATKPGRHSIDFEISGSDAVTIRNPTPSSIYVTN
KRNINYNLVNVTTNVFQPQCSATTYLTNMRCSSYHSLSLKSICSFYRNGL
TSIISKGGFSIPLTPIGINGRHLYGKLEIDPIHQLESYVFNRPQTKCRTC
TGETFDSNTIDHLISFGYYPHAVLKILSRVLAIDGFYMTAPQDSSFSPMN
LKSVVGHGAKLQRQCPGLKLDNNFVYSIYRPDFPVKLNIIGSELEIVGAC
LLYNLCQDEVAISLPNAIDVTNVFNTVLPVELVESVNVRSFVSKPANNEL
VFDADVKINIKRLSLISVGMICIWSEKTLRKVLLENNSPITISTKHSKLN
AETRFPILQGKQILMILKDNQGNVSITKKDKESKTSFILEASSSGEFKVD
SSVLRLQPSGKINLQQSFYLTSAKPGSIKNLRRLMLWIRAAKSLENRFKT
LLSKIRDGTDIIAHHYDKFKHKLQLLSEVLNTPLPHNITKAFECTEQVRE
ATFDLINSLKAISTIEVKLKTLCDRLVRGLQRYQNLNIEMDTPTSGLKEE
RTSISFMGRFCLHNLCIRDLLIKIDDSSTNDFINIEASPVNAIVKLSSRI
SIDQDHKLSLKTKKYENKVTGHLNATVRIYDSLTTDVTFQLSEKEAAYQI
EDVEFNPGFSFNITGQSNIETVTWGSLMNKIRGQSNDRSVFVSEVQHTFE
NKASRMNKRSKATKSSLEEKRKRYQETEKALKTFQQKLRFSEKNYNKIQA
EYRQAALNLKRSQLSMDQYLKLHPALTQFIEKDLDSICQMQSCQKQCLQM
PVCDICQKEVQIPTKVINCQQSVQYLKVQRLKQFTKTCHLRRYVFTTIYT
GTCGYPAHHGRQEGHTSALVAIGSAVGWMVGFPLLGPVLGFLGGLFSSCD
ETYDVITTPFTIQEACTELRSYTTTIKRPYSVCLNKEINVKTGFSLPRQC
NCHVRKCIAKMENLECTFKNLECKKNRELYVKSNKKLPGNYTDLWTSILT
FKNDIQNLDMVSQQIKLNRDKLKRKVEQRTNMLMKYKQQLKFTEQTMFNM
ESLFRQEMCISKLFTKYGGDISNIITIEDITFHGNLPILSSIELNVLGRE
KSTGKEILLPIVYQLSDKVVNIKEAAKSLLKKILCHEGSKRTRRSTNINI
PEKVKRANSLCLKLNEALVFLNETTKELTETIRDAIKNKNQRIENNYTES
SMENSARKLLLDGISEEIKEFETKQNMSTVTSQLIGNMEIFVSLQNKTRC
TSFEDCLEDTFEILEDLPSMMKPGYQDYKLSLPNVKQLFMEIFINQTLAD
KTLEGQLEAVDKIHRYIHFVSTSVYHCSEPPVITRKSASAEIDIPKGEIK
TLYCSSRGVTPVKMFWTKDGSIIDGEDGSGHETKRFRRNQDEVLTLKITT
DFQSTGSYKCIVSSDIGDTESNETLVFVYELPVIQTHPSDIYHMVXTAA
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_034253XLOC_034253Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00054322TCONS_00054322Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000436Sushi_SCR_CCP_dom
IPR000742EGF-like_dom
IPR001881EGF-like_Ca-bd_dom
IPR013783Ig-like_fold
IPR000152EGF-type_Asp/Asn_hydroxyl_site
IPR013032EGF-like_CS
IPR018097EGF_Ca-bd_CS
IPR011489EMI_domain
IPR007110Ig-like_dom
IPR009030Growth_fac_rcpt_
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005509 calcium ion binding
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1604..1624
NoneNo IPR availableCOILSCoilCoilcoord: 1833..1853
NoneNo IPR availableCOILSCoilCoilcoord: 1669..1689
NoneNo IPR availableCOILSCoilCoilcoord: 1357..1408
NoneNo IPR availableGENE3D2.10.25.10coord: 431..459
e-value: 1.7E-4
score: 21.4
coord: 302..321
e-value: 2.0E-8
score: 34.0
NoneNo IPR availableGENE3D2.10.25.10coord: 385..403
e-value: 1.2E-12
score: 47.0
coord: 161..183
e-value: 1.9E-8
score: 33.5
coord: 214..232
e-value: 1.4E-12
score: 46.8
coord: 343..361
e-value: 3.6E-11
score: 42.2
coord: 258..278
e-value: 5.7E-11
score: 41.6
NoneNo IPR availableGENE3D2.10.70.10coord: 504..561
e-value: 1.0E-5
score: 25.5
NoneNo IPR availableGENE3D2.10.25.10coord: 184..213
e-value: 8.6E-8
score: 31.6
NoneNo IPR availableGENE3D2.10.25.10coord: 279..301
e-value: 7.5E-9
score: 35.1
NoneNo IPR availableGENE3D2.10.25.10coord: 138..160
e-value: 1.3E-6
score: 27.7
NoneNo IPR availableGENE3D2.10.25.10coord: 111..137
e-value: 0.081
score: 12.6
NoneNo IPR availableGENE3D2.10.25.10coord: 233..257
e-value: 1.1E-6
score: 28.1
coord: 362..384
e-value: 5.1E-8
score: 32.4
coord: 404..430
e-value: 1.1E-10
score: 40.9
coord: 322..342
e-value: 1.4E-9
score: 37.4
NoneNo IPR availableGENE3D2.10.25.10coord: 562..608
e-value: 2.1E-5
score: 23.9
NoneNo IPR availableGENE3D2.10.70.10coord: 460..503
e-value: 4.8E-13
score: 49.0
NoneNo IPR availablePFAMPF14670FXa_inhibitioncoord: 408..443
e-value: 3.1E-9
score: 36.9
coord: 371..402
e-value: 2.2E-8
score: 34.1
NoneNo IPR availableCDDcd00054EGF_CAcoord: 139..169
e-value: 4.79007E-5
score: 42.2386
NoneNo IPR availableCDDcd00054EGF_CAcoord: 319..353
e-value: 1.37552E-6
score: 46.861
NoneNo IPR availableCDDcd00054EGF_CAcoord: 183..225
e-value: 2.4471E-6
score: 46.0906
NoneNo IPR availableCDDcd00096Igcoord: 2001..2072
e-value: 8.74072E-5
score: 41.7059
NoneNo IPR availableSUPERFAMILY57196EGF/Laminincoord: 567..611
IPR000436Sushi/SCR/CCP domainSMARTSM00032CCP_2coord: 506..563
e-value: 0.0068
score: 25.6
coord: 448..501
e-value: 2.1E-11
score: 53.9
IPR000436Sushi/SCR/CCP domainPFAMPF00084Sushicoord: 448..501
e-value: 4.5E-6
score: 27.1
IPR000436Sushi/SCR/CCP domainPROSITEPS50923SUSHIcoord: 504..565
score: 6.645
IPR000436Sushi/SCR/CCP domainPROSITEPS50923SUSHIcoord: 441..503
score: 9.059
IPR000436Sushi/SCR/CCP domainCDDcd00033CCPcoord: 448..501
e-value: 1.00497E-8
score: 53.2356
IPR000436Sushi/SCR/CCP domainCDDcd00033CCPcoord: 506..563
e-value: 0.00116385
score: 38.2128
IPR000436Sushi/SCR/CCP domainSUPERFAMILY57535Complement control module/SCR domaincoord: 448..515
IPR000436Sushi/SCR/CCP domainSUPERFAMILY57535Complement control module/SCR domaincoord: 500..564
IPR000742EGF-like domainSMARTSM00181egf_5coord: 407..444
e-value: 5.4E-5
score: 32.6
coord: 322..361
e-value: 6.8E-5
score: 32.3
coord: 235..276
e-value: 1.9E-4
score: 30.8
coord: 142..182
e-value: 0.018
score: 24.2
coord: 192..231
e-value: 2.2
score: 17.3
coord: 1437..1470
e-value: 140.0
score: 2.7
coord: 280..318
e-value: 0.027
score: 23.7
coord: 109..137
e-value: 0.52
score: 19.4
coord: 365..403
e-value: 0.0037
score: 26.5
coord: 568..604
e-value: 0.45
score: 19.6
IPR000742EGF-like domainPROSITEPS50026EGF_3coord: 106..137
score: 8.455
IPR000742EGF-like domainPROSITEPS50026EGF_3coord: 404..444
score: 10.071
IPR000742EGF-like domainPROSITEPS50026EGF_3coord: 139..174
score: 8.278
IPR000742EGF-like domainPROSITEPS50026EGF_3coord: 319..361
score: 12.279
IPR000742EGF-like domainPROSITEPS50026EGF_3coord: 232..272
score: 7.415
IPR000742EGF-like domainPROSITEPS50026EGF_3coord: 362..403
score: 8.357
IPR000742EGF-like domainPROSITEPS50026EGF_3coord: 565..604
score: 16.864
IPR001881EGF-like calcium-binding domainSMARTSM00179egfca_6coord: 232..276
e-value: 4.3E-10
score: 49.5
coord: 277..318
e-value: 1.2E-6
score: 38.0
coord: 404..444
e-value: 7.7E-11
score: 52.0
coord: 362..403
e-value: 6.0E-7
score: 39.1
coord: 183..231
e-value: 1.3E-5
score: 34.7
coord: 319..361
e-value: 9.9E-11
score: 51.7
coord: 139..182
e-value: 3.1E-9
score: 46.7
IPR001881EGF-like calcium-binding domainPFAMPF07645EGF_CAcoord: 277..317
e-value: 8.1E-6
score: 25.9
coord: 139..175
e-value: 5.4E-6
score: 26.4
coord: 183..230
e-value: 1.7E-5
score: 24.9
coord: 319..360
e-value: 1.7E-8
score: 34.4
coord: 232..275
e-value: 8.8E-5
score: 22.5
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 1972..2088
e-value: 1.7E-10
score: 40.3
IPR000152EGF-type aspartate/asparagine hydroxylation sitePROSITEPS00010ASX_HYDROXYLcoord: 419..430
IPR000152EGF-type aspartate/asparagine hydroxylation sitePROSITEPS00010ASX_HYDROXYLcoord: 153..164
IPR000152EGF-type aspartate/asparagine hydroxylation sitePROSITEPS00010ASX_HYDROXYLcoord: 251..262
IPR000152EGF-type aspartate/asparagine hydroxylation sitePROSITEPS00010ASX_HYDROXYLcoord: 336..347
IPR000152EGF-type aspartate/asparagine hydroxylation sitePROSITEPS00010ASX_HYDROXYLcoord: 378..389
IPR013032EGF-like, conserved sitePROSITEPS01186EGF_2coord: 428..443
IPR013032EGF-like, conserved sitePROSITEPS00022EGF_1coord: 125..136
IPR013032EGF-like, conserved sitePROSITEPS01186EGF_2coord: 387..402
IPR013032EGF-like, conserved sitePROSITEPS01186EGF_2coord: 125..136
IPR013032EGF-like, conserved sitePROSITEPS01186EGF_2coord: 345..360
IPR018097EGF-like calcium-binding, conserved sitePROSITEPS01187EGF_CAcoord: 232..260
IPR018097EGF-like calcium-binding, conserved sitePROSITEPS01187EGF_CAcoord: 362..387
IPR018097EGF-like calcium-binding, conserved sitePROSITEPS01187EGF_CAcoord: 404..428
IPR011489EMI domainPROSITEPS51041EMIcoord: 28..112
score: 9.336
IPR007110Immunoglobulin-like domainPROSITEPS50835IG_LIKEcoord: 1980..2076
score: 12.259
IPR007110Immunoglobulin-like domainSUPERFAMILY48726Immunoglobulincoord: 1980..2086
IPR009030Growth factor receptor cysteine-rich domainSUPERFAMILY57184Growth factor receptor domaincoord: 314..448
IPR009030Growth factor receptor cysteine-rich domainSUPERFAMILY57184Growth factor receptor domaincoord: 94..232
IPR009030Growth factor receptor cysteine-rich domainSUPERFAMILY57184Growth factor receptor domaincoord: 194..319

Blast
[Close]
BLAST of TCONS_00054322-protein vs. Swiss-Prot (Human)
Match: MATN2 (Matrilin-2 OS=Homo sapiens GN=MATN2 PE=1 SV=4)

HSP 1 Score: 192.971 bits (489), Expect = 1.092e-49
Identity = 109/299 (36.45%), Postives = 156/299 (52.17%), Query Frame = 0 
Query:  149 CSQTCSNLPGTFSCSCNKGFIKAKPNSPIDGTCLDVDECSSVKPCKCAVSSPGCSAKCSNTIGSFSCSCNKGFELKYNGQICADVNECERAKARKNKICHHNCINSIGNYYCTCNKGFHLDRDQKTCKDTNECSTLNGGCNQICRNKVGSYGCLCNHGYRLSIANQKTCLDINECLEQKP-CDEKHGICTNLLGTFRCSCKTGYYLMPDKKTCRDRDECARISTNGCQQICYNTVGSYTCSCTNGFRLNEDGRKCGDIDECSVKADNCQHFCHNTIGLFTCSCKPGFKLNKDGHTCQAL 446
            C+  C N+PG++ C C +G+I            L+ D+ +      CA+    C   C N  GSF C C  G+ L  +G+ C  V+ C    A +N  C H C+N+ G+Y C C++GF L+ D+KTC   + C++ N GC   C N   SY C C  G+ L+  ++KTC  IN C   KP C+ +   C N+  ++ C C  GY L P+ KTC   D CA+   +GC+Q+C NT  S+ C C+ GF +NED + C  +D C +    C++ C N    F C C  G  L  DG TC  L
Sbjct:  249 CAHFCINIPGSYVCRCKQGYI------------LNSDQTTCRIQDLCAMEDHNCEQLCVNVPGSFVCQCYSGYALAEDGKRCVAVDYC----ASENHGCEHECVNADGSYLCQCHEGFALNPDKKTCTKIDYCASSNHGCQHECVNTDDSYSCHCLKGFTLN-PDKKTCRRINYCALNKPGCEHE---CVNMEESYYCRCHRGYTLDPNGKTCSRVDHCAQ-QDHGCEQLCLNTEDSFVCQCSEGFLINEDLKTCSRVDYCLLSDHGCEYSCVNMDRSFACQCPEGHVLRSDGKTCAKL 526

HSP 2 Score: 187.578 bits (475), Expect = 5.650e-48
Identity = 122/365 (33.42%), Postives = 173/365 (47.40%), Query Frame = 0 
Query:  124 VCQCKAGFV----GRRCETDVNECVTK-KPCSQTCSNLPGTFSCSCNKGFIKAKPNSPIDGTCLDVDECSSVKPCKCAVSSPGCSAKCSNTIGSFSCSCNKGFELKYNGQICADVNECERAKARKNKICHHNCINSIGNYYCTCNKGFHLDRDQKTCKDTNECSTLNGGCNQICRNKVGSYGCLCNHGYRLSIANQKTCLDINECL-----------------------------EQKPCDE-------KHGI---CTNLLGTFRCSCKTGYYLMPDKKTCRDRDECARISTNGCQQICYNTVGSYTCSCTNGFRLNEDGRKCGDIDECSVKADNCQHFCHNTIGLFTCSCKPGFKLNKDGHTCQ 444
            VCQC +G+     G+RC   V+ C ++   C   C N  G++ C C++GF      +P   TC  +D C+S        S+ GC  +C NT  S+SC C KGF L  + + C  +N C    A     C H C+N   +YYC C++G+ LD + KTC   + C+  + GC Q+C N   S+ C C+ G+ ++  + KTC  ++ CL                             + K C +        HG    C +   +F C C  GY L  D KTCR +D C  I  +GC+ IC N+  SYTC C  GFRL EDG++C   D C      C+H C N    + C C  GF L +DG  C+
Sbjct:  302 VCQCYSGYALAEDGKRC-VAVDYCASENHGCEHECVNADGSYLCQCHEGFAL----NPDKKTCTKIDYCAS--------SNHGCQHECVNTDDSYSCHCLKGFTLNPDKKTCRRINYC----ALNKPGCEHECVNMEESYYCRCHRGYTLDPNGKTCSRVDHCAQQDHGCEQLCLNTEDSFVCQCSEGFLIN-EDLKTCSRVDYCLLSDHGCEYSCVNMDRSFACQCPEGHVLRSDGKTCAKLDSCALGDHGCEHSCVSSEDSFVCQCFEGYILREDGKTCRRKDVCQAID-HGCEHICVNSDDSYTCECLEGFRLAEDGKRCRRKDVCKSTHHGCEHICVNNGNSYICKCSEGFVLAEDGRRCK 647

HSP 3 Score: 118.627 bits (296), Expect = 1.711e-26
Identity = 69/167 (41.32%), Postives = 88/167 (52.69%), Query Frame = 0 
Query:  281 CSTLNGGCNQICRNKVGSYGCLCNHGYRLSIANQKTCLDINEC-LEQKPCDEKHGICTNLLGTFRCSCKTGYYLMPDKKTCRDRDECARISTNGCQQICYNTVGSYTCSCTNGFRLNEDGRKCGDIDECSVKADNCQHFCHNTIGLFTCSCKPGFKLNKDGHTCQAL 446
            CSTL   C   C N  GSY C C  GY L+ ++Q TC   + C +E   C++   +C N+ G+F C C +GY L  D K C   D CA    +GC+  C N  GSY C C  GF LN D + C  ID C+     CQH C NT   ++C C  GF LN D  TC+ +
Sbjct:  242 CSTLEHNCAHFCINIPGSYVCRCKQGYILN-SDQTTCRIQDLCAMEDHNCEQ---LCVNVPGSFVCQCYSGYALAEDGKRCVAVDYCAS-ENHGCEHECVNADGSYLCQCHEGFALNPDKKTCTKIDYCASSNHGCQHECVNTDDSYSCHCLKGFTLNPDKKTCRRI 403
The following BLAST results are available for this feature:
BLAST of TCONS_00054322-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MATN21.092e-4936.45Matrilin-2 OS=Homo sapiens GN=MATN2 PE=1 SV=4[more]
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