TCONS_00054339-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00054339-protein
Unique NameTCONS_00054339-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length183

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00054339-protein ID=TCONS_00054339-protein|Name=TCONS_00054339-protein|organism=Clytia hemisphaerica|type=polypeptide|length=183bp
FHLKSSLQLLNQVQEDLKTTKMKTIILIAIFAACSAEFYHPCPDRLCHGA
SLGSIFGLGDKHRTPDIFVQCAPGAHGKLRAVCQKCPRHQVFSRKFSVCV
RRTFAVCKGKHCKPHAFKPHPKECPKSLCADYPHSDYVVFRYPHKPTYYV
QCTAGRPVCRQCPHGLIFNNDIKVCDFPPAKKH
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_034263XLOC_034263Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00054339TCONS_00054339Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002557Chitin-bd_dom
Vocabulary: Cellular Component
TermDefinition
GO:0005576extracellular region
Vocabulary: Biological Process
TermDefinition
GO:0006030chitin metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0008061chitin binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006030 chitin metabolic process
cellular_component GO:0005576 extracellular region
molecular_function GO:0008061 chitin binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002557Chitin binding domainSMARTSM00494chi_10coord: 122..180
e-value: 0.011
score: 25.0
coord: 40..109
e-value: 4.7
score: 12.2
IPR002557Chitin binding domainPFAMPF01607CBM_14coord: 140..179
e-value: 3.2E-7
score: 30.3
IPR002557Chitin binding domainGENE3D2.170.140.10coord: 116..181
e-value: 9.8E-8
score: 31.3
coord: 31..115
e-value: 0.0028
score: 17.0
IPR002557Chitin binding domainPROSITEPS50940CHIT_BIND_IIcoord: 44..109
score: 7.393
IPR002557Chitin binding domainPROSITEPS50940CHIT_BIND_IIcoord: 126..183
score: 8.687
IPR002557Chitin binding domainSUPERFAMILY57625Invertebrate chitin-binding proteinscoord: 133..178

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00054339-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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