TCONS_00054420-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00054420-protein
Unique NameTCONS_00054420-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length579

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00054420-protein ID=TCONS_00054420-protein|Name=TCONS_00054420-protein|organism=Clytia hemisphaerica|type=polypeptide|length=579bp
MRVLTWIISLALVAYIQSYTIPENDLLDLPKGKDLLDQEYIFDDLWEKVK
SAASRLVDSVKASTQKIIEQYKPQILAALENVKKVVIKGVKDLILEVVNG
IVKIIIDGVSSTSDGKDHPEFDLVSFPIFEVIDSSSIPTINFVTDAWKKV
TDAFEKAGDKISNQTRALIEKYKPKVTDALTRVKKVIIDEGKRIVIEIIG
DIVKIVVEDLQEDEIVKELAALSEDSELMDAEFFFSELWEKVKSAANRLI
DSVKATTQKIIEQYKPQILAALENVQKVVIKGAKDLIIEVVNGIVKIITD
GVSSTSDGKDHPEFAVVSFSIYEEIDSSSIPRINFVTDAWKKVTDAFEKA
GDKISNQTRALIEKYKPKVTDALTRVKKVIIDEGKRIVIEIIGDIVKIVV
GDLSEDKIVLAKRNILTDLWQKVKSAAQHLSSQIRTYAEKMLQKYRPQIM
TTLKVVGEVVIDQVRKIIIRIIKDGIVGIFVNGEAVTSDGSAFMLPEKRI
YAVLDQSPPQINIFKDAWSKVKAFVEDKVNKISSSVKAIIEKYRPQIEEG
LEKAKKIVIKHGKLIIIEIIGVVISIIVL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_034299XLOC_034299Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00054420TCONS_00054420Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016024ARM-type_fold
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005488 binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.5.1230coord: 35..191
e-value: 3.6E-9
score: 36.2
NoneNo IPR availableGENE3D1.10.287.700coord: 333..454
e-value: 1.5E-5
score: 24.7
coord: 226..311
e-value: 9.4E-4
score: 18.9
coord: 511..562
e-value: 0.006
score: 16.3
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 506..523
coord: 383..472
coord: 39..309

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00054420-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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