TCONS_00054498-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00054498-protein
Unique NameTCONS_00054498-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length214

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00054498-protein ID=TCONS_00054498-protein|Name=TCONS_00054498-protein|organism=Clytia hemisphaerica|type=polypeptide|length=214bp
MSVLHGISKKFLSTKKKNKARTYTNSTNIAIFGASGVGKTTIINSFAKSI
YGKTTIFRPTITECYERKIILRSQDGTVCKHELSILDTAGDLRYDFQTLH
KQAIQNSEAFVLVFSLDDEDSLKEMEYILQDIDSIKKSKNTPILIIANKS
DLVNKKSMHLQRIRNKLAMLNRGLCFEKSALRTDELNECFVSLLTKVEKR
KGIDRSFYGVQIMC
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_034361XLOC_034361Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00054498TCONS_00054498Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001806Small_GTPase
IPR005225Small_GTP-bd_dom
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
GO:0003924GTPase activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003924 GTPase activity
molecular_function GO:0005525 GTP binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 139..152
score: 39.58
coord: 175..197
score: 24.46
coord: 27..48
score: 31.93
coord: 74..96
score: 29.91
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 29..200
e-value: 2.8E-7
score: -18.8
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 24..200
e-value: 1.6E-10
score: 33.0
NoneNo IPR availableSMARTSM00174rho_sub_3coord: 29..199
e-value: 0.0019
score: -72.8
NoneNo IPR availableGENE3D3.40.50.300coord: 39..203
e-value: 9.8E-28
score: 96.2
NoneNo IPR availableGENE3D3.40.50.300coord: 10..38
e-value: 0.12
score: 11.1
NoneNo IPR availablePROSITEPS51419RABcoord: 22..214
score: 14.392
IPR001806Small GTPase superfamilyPFAMPF00071Rascoord: 29..198
e-value: 4.5E-26
score: 91.3
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 26..168
e-value: 7.4E-17
score: 59.6
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 23..200

Blast
[Close]
BLAST of TCONS_00054498-protein vs. Swiss-Prot (Human)
Match: DIRA2 (GTP-binding protein Di-Ras2 OS=Homo sapiens GN=DIRAS2 PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.635e-17
Identity = 57/187 (30.48%), Postives = 96/187 (51.34%), Query Frame = 0 
Query:   24 TNSTNIAIFGASGVGKTTIINSFAKSIYGKTTIFRPTITECYERKIILRSQDGTVCKHELSILDTAGDLRYDFQTLHKQAIQNSEAFVLVFSLDDEDSLKEMEYILQDIDSIKKS-KNTPILIIANKSDLVNKKSMHLQRIRNKLAMLNRGLCFEKSALRTDELNECFVSLLTKVEKRKGIDRSFYG 209
            +N   +A+FGA GVGK++++  F K  + ++ I  PT+ + Y R++I  S D ++C   L I DT G   + F  + + +I    AF+LV+S+    SL+E++ I + I  IK   ++ PI+++ NK D    + +        LA   +    E SA     + E F  LL  +EKR+ +     G
Sbjct:    5 SNDYRVAVFGAGGVGKSSLVLRFVKGTFRESYI--PTVEDTY-RQVI--SCDKSICT--LQITDTTGS--HQFPAMQRLSISKGHAFILVYSITSRQSLEELKPIYEQICEIKGDVESIPIMLVGNKCDESPSREVQSSEA-EALARTWKCAFMETSAKLNHNVKELFQELLN-LEKRRTVSLQIDG 180
The following BLAST results are available for this feature:
BLAST of TCONS_00054498-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DIRA22.635e-1730.48GTP-binding protein Di-Ras2 OS=Homo sapiens GN=DIR... [more]
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