TCONS_00054528-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00054528-protein
Unique NameTCONS_00054528-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length261

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00054528-protein ID=TCONS_00054528-protein|Name=TCONS_00054528-protein|organism=Clytia hemisphaerica|type=polypeptide|length=261bp
MSCAGTFASITNIISLAVGDDIKLDSTIYFSIASLVLFACIFVYIGMFRL
PVLKDKFEIKLYDDKMSSTPSTSSGENDCTGEQSFCAVIRNIYPTALSVM
CVFAVTLTIQPAILSGIRSVNESNGSAFTNKYFTAVVGFLIFNVGDFVGR
IISGFVRIVDKKGPWLPILCVARIAFIPLFMFCNFQPRHHLTVVFNKDIY
PVIFNILFSVSNGYLASLCMMYGPERAPEGMMETAGATMQLFLTIGLGLG
SVLSLAIVDTI
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_034381XLOC_034381Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00054528TCONS_00054528Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002259Eqnu_transpt
IPR020846MFS_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005337nucleoside transmembrane transporter activity
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Biological Process
TermDefinition
GO:0006810transport
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006810 transport
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0005337 nucleoside transmembrane transporter activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002259Equilibrative nucleoside transporterPRINTSPR01130DERENTRNSPRTcoord: 198..214
score: 51.96
coord: 217..233
score: 33.33
coord: 25..48
score: 20.14
coord: 235..259
score: 45.33
IPR002259Equilibrative nucleoside transporterPFAMPF01733Nucleoside_trancoord: 3..257
e-value: 3.1E-54
score: 184.4
NoneNo IPR availableGENE3D1.20.1250.20coord: 87..261
e-value: 4.7E-7
score: 28.9
IPR020846Major facilitator superfamily domainSUPERFAMILY103473MFS general substrate transportercoord: 33..260

Blast
[Close]
BLAST of TCONS_00054528-protein vs. Swiss-Prot (Human)
Match: S29A1 (Equilibrative nucleoside transporter 1 OS=Homo sapiens GN=SLC29A1 PE=1 SV=3)

HSP 1 Score: 150.984 bits (380), Expect = 9.971e-43
Identity = 95/269 (35.32%), Postives = 143/269 (53.16%), Query Frame = 0 
Query:    4 AGTFASITNIISLAVGDDIKLDSTIYFSIASLVLFACIFVYIGMFRLPVLKDKFEIKLYD--DKMSSTPSTSSGENDCTGEQ----------------SFCAVIRNIYPTALSVMCVFAVTLTIQPAILSGIRSVNESNGSAFTNKYFTAVVGFLIFNVGDFVGRIISGFVRIVDKKGPWLPILCVARIAFIPLFMFCNFQPRHHLTVVFNKDIYPVIFNILFSVSNGYLASLCMMYGPERAPEGMMETAGATMQLFLTIGLGLGSVLS 254
            AG FAS+  I ++A G ++   +  YF  A  V+   I  Y+G+ RL   +   ++KL    ++ +     S GE    G++                S  A+++NI   A SV  +F +T+ + PA+   ++S     GS+   +YF  V  FL FN+ D++GR ++       K   WLP L +AR+ F+PL + CN +PR +LTVVF  D + + F   F+ SNGYLASLCM +GP++      ETAGA M  FL +GL LG+V S
Sbjct:  183 AGFFASVAMICAIASGSELSESAFGYFITACAVIILTIICYLGLPRLEFYRYYQQLKLEGPGEQETKLDLISKGEEPRAGKEESGVSVSNSQPTNESHSIKAILKNISVLAFSVCFIFTITIGMFPAVTVEVKS--SIAGSSTWERYFIPVSCFLTFNIFDWLGRSLTAVFMWPGKDSRWLPSLVLARLVFVPLLLLCNIKPRRYLTVVFEHDAWFIFFMAAFAFSNGYLASLCMCFGPKKVKPAEAETAGAIMAFFLCLGLALGAVFS 449
The following BLAST results are available for this feature:
BLAST of TCONS_00054528-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
S29A19.971e-4335.32Equilibrative nucleoside transporter 1 OS=Homo sap... [more]
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