TCONS_00054531-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00054531-protein
Unique NameTCONS_00054531-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1306

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00054531-protein ID=TCONS_00054531-protein|Name=TCONS_00054531-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1306bp
FHLQVSDRIDIASMVMRLKTQSNFPNMQSVLWNRKAFGEKSMLGFSKEPN
KLELVINIKTLELAYNQLCVHSGDMFQGFLAGQIDFEQDNNHLEIQIDRF
DPGRESQNKVNTEVSKIPTAILPGDLCVPVTLQHGMAYIDHKSTETYTTV
DFLKAFHILSDCLSHKNTCNLNQLLSIKIKCSFTTSGEQVLAYISACGIT
ISMQIELTPINQIPIIPTALARNLEESLSLSNDNSQIKTGFMTMDQTRKL
LLVLESDPKATTLPLIGVWISGVDDAHCPEVWACCMRFFHNKAISERVSA
PPQSFLLLLFSPINANPLFYEFTKKSNNRDERKLDFNFVSMCEGVPLQQV
DSEDDDDGICFELTTPSSGLIKSNFQTALARYHGKELPIQQEPASSSSNI
SLDDSLPKNFHEPISPHPQATLHQPSSLDISLCESLNSSLSPIEEQKSTT
EPIAETSPKQKTQPTSAANVPKEYNMKYPRPTKASIIRMNLNKPNQVTDD
KKHKNNNRLAINFDKSKCKSSKPKSSLSKEEVLRQVDQFIQKQNDNLNRE
MAAKQKDIRESLTGDRPNESVPRVPVGLRHEEPLQNTHKTLSVVLEPTYC
PENYSDFEERFETEESFHIPKTGNKDDDDSPCSSTVDEKSISDEGRIDFD
KEICNDGIEQVDYPTVKPTDQIFTPANPSKGTENPGVKPSRKVLSTSLSN
VSNAEINTIIQPVKHTSQNKNDRSIEDATSKEKDELYKLLYQQQSQLTAL
QNQLQVFMNHQEKLSELSKKRSEEEKESEEEGQKKVRHDEERKETQTLME
MQNAQQNQLQELQKQVQVFLEATNNQQKQEQEEEERKTISVETSVQCSTP
PPAIPSPPSPPLISTGVNTGRSLLWPTENLAITQSDTSLRGTQQAVLPNS
STKPAHDVKRLSNNNNNKPCPCCRNHFEKMSHPSYSDHKLPAPPTPPHRS
TTTAPMAVPDDSSFHDDTQTSSVSDLQTVDIPSINNTTDTSQSITSTLSK
VDMPVFEENSQQETPTKNNRMADLTNEWERSPQLGESASMLVEKRRREEQ
QHEDEDTVVEENLLNNKQFYQQMMNQVQKLIIAQSDENDHVSHRQSDDEN
PLPIPAPKPLSPEEKLEHIRSTTVKELQKMIPQDLLQQHQPVVGQMQPND
RQRSMSAAINSYPKINYTSMSSVDDTFYDYATSTIDKIASKYVSQEIFHQ
QQEITKNKTVKFEGVYEWQTSNRNGITNKNMASVNFSCNMSIASKKYLQK
YSLEASDDDKRKPFQEGNGRPAMIRSRDGNQENEENNGKENKVLDYKKLQ
SLPKLK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_034383XLOC_034383Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00054531TCONS_00054531Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR026123Sil
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 757..784
NoneNo IPR availableCOILSCoilCoilcoord: 795..837
NoneNo IPR availableGENE3D1.20.140.50coord: 520..1080
e-value: 0.026
score: 13.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 932..974
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 825..863
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 665..691
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1087..1111
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 441..475
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 388..426
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 765..795
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1256..1306
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 612..648
IPR026123SCL-interrupting locus proteinPFAMPF15253STIL_Ncoord: 31..432
e-value: 1.0E-89
score: 301.3

Blast
[Close]
BLAST of TCONS_00054531-protein vs. Swiss-Prot (Human)
Match: STIL (SCL-interrupting locus protein OS=Homo sapiens GN=STIL PE=1 SV=2)

HSP 1 Score: 196.823 bits (499), Expect = 7.091e-51
Identity = 106/299 (35.45%), Postives = 168/299 (56.19%), Query Frame = 0 
Query:   23 NFPNMQSVLWNRKAFGEKSMLGFSKEPNKLELVINIKTLELAYNQLCVHSGDMFQGFLAGQIDFEQDNNHLEIQIDRFDPGRESQNKVNTEVSKIPTAILPGDLCVPVTLQHGMAYIDHKSTETYTTVDFLKAFHILSDCLSHKNTCNLNQLLSIKIKCSFTTSGEQVLAYISACGITISMQIELTPINQIPIIPTALARNLEESLSLSNDNSQIKTGFMTMDQTRKLLLVLESDPKATTLPLIGVWISGVDDAHCPEVWACCMRFFHNKAISERVSAPPQSFLLLLFSPINANPLFYE 321
            +FP  +  LWN    G+   L  S   N  +LV+  KT+ LAY     +  +    FL G +  ++D   + + +DRFDPGRE    V   +   PTA LPGD  +P  +      +  +    ++  DF  A   L   +  K++ +  +LLS+++  +   S + V   +    +T++   + TP+  IPIIPTALARNL  +L++S      K G++TMD+TRKLLL+LESDPK  +LPL+G+W+SG+   + P+VWACC+R+  N ++ ERV +   +F+++L+S  +  P FYE
Sbjct:   25 HFPPSKCALWNPTPTGDFIYLHLSYYRNP-KLVVTEKTIRLAYRHAKQNKKNS-SCFLLGSLTADEDEEGVTLTVDRFDPGRE----VPECLEITPTASLPGDFLIPCKVH--TQELCSREMIVHSVDDFSSALKALQCHICSKDSLDCGKLLSLRVHITSRESLDSVEFDLHWAAVTLANNFKCTPVKPIPIIPTALARNLSSNLNISQVQGTYKYGYLTMDETRKLLLLLESDPKVYSLPLVGIWLSGITHIYSPQVWACCLRYIFNSSVQERVFSESGNFIIVLYSMTHKEPEFYE 315
The following BLAST results are available for this feature:
BLAST of TCONS_00054531-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
STIL7.091e-5135.45SCL-interrupting locus protein OS=Homo sapiens GN=... [more]
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