TCONS_00054579-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00054579-protein
Unique NameTCONS_00054579-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length397

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00054579-protein ID=TCONS_00054579-protein|Name=TCONS_00054579-protein|organism=Clytia hemisphaerica|type=polypeptide|length=397bp
MREKKNEKGKSKMAEEEAVEKEVIKATEITHKLGHERGHGAECLKCGPKC
EGLDLHFWRKICKNCYCRYDEHDVKSEEEIHHGIVKNIFRKERGLSDEIG
KLQIFDPEKQPAIAEQVKANFIKVPEVSSPFAMSKYLKQLPKEKDAFQGE
AGQQYRNHQLQQQLPAHDFDPAFCNKLSDQEKDRMQKFTDVRDDDAGQGA
IKEKTAKEKTHWKCEKCGENLMIGEVAIFAEKAGKDKCWHPNCFVCDTCQ
ELLVDLIYFFKDGKIFCGRHYGELTRVRCAACDELIFTKEYTQAEDQNWH
LQHFCCLKCDKMLGGQKYVARDGKPYCMGCYDTTFAKTCQTCKQRIAADA
KRVSYKDANWHASEECFRCLACSEPMLGKQFIYKNKDVYCSGACARK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_034399XLOC_034399Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00054579TCONS_00054579Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001781Znf_LIM
IPR010442PET_domain
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0008270 zinc ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001781Zinc finger, LIM-typeSMARTSM00132lim_4coord: 213..270
e-value: 9.0E-10
score: 48.5
coord: 338..393
e-value: 2.9E-7
score: 40.1
coord: 278..330
e-value: 4.3E-14
score: 62.8
IPR001781Zinc finger, LIM-typePFAMPF00412LIMcoord: 279..333
e-value: 1.7E-13
score: 50.5
coord: 214..273
e-value: 7.0E-11
score: 42.1
coord: 339..392
e-value: 2.7E-8
score: 33.8
IPR001781Zinc finger, LIM-typePROSITEPS00478LIM_DOMAIN_1coord: 279..313
IPR001781Zinc finger, LIM-typePROSITEPS50023LIM_DOMAIN_2coord: 212..276
score: 10.227
IPR001781Zinc finger, LIM-typePROSITEPS50023LIM_DOMAIN_2coord: 338..397
score: 7.089
IPR001781Zinc finger, LIM-typePROSITEPS50023LIM_DOMAIN_2coord: 277..337
score: 13.543
IPR010442PET domainPFAMPF06297PETcoord: 123..202
e-value: 3.3E-20
score: 72.1
IPR010442PET domainPROSITEPS51303PETcoord: 102..210
score: 17.849
NoneNo IPR availableGENE3D2.10.110.10coord: 278..340
e-value: 1.7E-18
score: 66.2
NoneNo IPR availableGENE3D2.10.110.10coord: 209..277
e-value: 6.9E-15
score: 54.3
NoneNo IPR availableGENE3D2.10.110.10coord: 341..397
e-value: 3.2E-13
score: 48.9
NoneNo IPR availableCDDcd09340LIM1_Testin_likecoord: 214..271
e-value: 8.36067E-31
score: 111.539
NoneNo IPR availableCDDcd09341LIM2_Testin_likecoord: 278..332
e-value: 1.86017E-28
score: 104.994
NoneNo IPR availableSUPERFAMILY57716Glucocorticoid receptor-like (DNA-binding domain)coord: 306..372
NoneNo IPR availableSUPERFAMILY57716Glucocorticoid receptor-like (DNA-binding domain)coord: 246..310

Blast
[Close]
BLAST of TCONS_00054579-protein vs. Swiss-Prot (Human)
Match: TES (Testin OS=Homo sapiens GN=TES PE=1 SV=1)

HSP 1 Score: 316.62 bits (810), Expect = 3.701e-105
Identity = 170/408 (41.67%), Postives = 230/408 (56.37%), Query Frame = 0 
Query:   33 LGHERGHGAECLKCGPKCEGLDLHFWRKICKNCYCRYDEHDVKSEEEIHHGIVK--------NIFRKERGLSDEIGKLQIFDPEKQPAIAEQVKANFIK---VPEVSSPFAMSKYLKQLPKEKDAFQGEAGQQYRNHQLQQQLPAHDFDPAFCNKLSDQEKDRMQKFT-----------DV--------------------RDDDAGQGAIKEKTAKEK-THWKCEKCGENLMIGEVAIFAEKAGKDKCWHPNCFVCDTCQELLVDLIYFFKDGKIFCGRHYGELTRVRCAACDELIFTKEYTQAEDQNWHLQHFCCLKCDKMLGGQKYVARDGKPYCMGCYDTTFAKTCQTCKQRIAADAKRVSYKDANWHASEECFRCLACSEPMLGKQFIYKNKDVYCSGACARK 397
            LGHE+G GA CLKC  KCEG +LHFWRKIC+NC C  +EHDV    E    + K         +  K +     + K  +       A  + V  N +     P V +     +Y++ LPKEK    G  G QYR  QL +QLPAHD DP+ C++LS +E   M++F            DV                    R   A  GA+++K+A+ K T + C  C  ++  G+ AI+AE+AG DK WHP CFVC TC ELLVD+IYF+K+ K++CGRHY +  + RCA CDELIF+ EYTQAE+QNWHL+HFCC  CD +L G+ YV  + KP C  CY    A  CQ C   I  + +RV+Y + +WHAS ECF C  CS+ ++G++F+     V+CS  C ++
Sbjct:   12 LGHEQGFGAPCLKCKEKCEGFELHFWRKICRNCKCGQEEHDVLLSNEEDRKVGKLFEDTKYTTLIAKLKSDGIPMYKRNVMILTNPVAAKKNVSINTVTYEWAPPVQNQALARQYMQMLPKEKQPVAGSEGAQYRKKQLAKQLPAHDQDPSKCHELSPREVKEMEQFVKKYKSEALGVGDVKLPCEMDAQGPKQMNIPGGDRSTPAAVGAMEDKSAEHKRTQYSCYCCKLSMKEGDPAIYAERAGYDKLWHPACFVCSTCHELLVDMIYFWKNEKLYCGRHYCDSEKPRCAGCDELIFSNEYTQAENQNWHLKHFCCFDCDSILAGEIYVMVNDKPVCKPCYVKNHAVVCQGCHNAIDPEVQRVTYNNFSWHASTECFLCSCCSKCLIGQKFMPVEGMVFCSVECKKR 419
The following BLAST results are available for this feature:
BLAST of TCONS_00054579-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TES3.701e-10541.67Testin OS=Homo sapiens GN=TES PE=1 SV=1[more]
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