TCONS_00054759-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00054759-protein
Unique NameTCONS_00054759-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length768

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00054759-protein ID=TCONS_00054759-protein|Name=TCONS_00054759-protein|organism=Clytia hemisphaerica|type=polypeptide|length=768bp
MIIIYRYYLFMLVQVGIARLEIISPNTVRNDVTDETYNSVLLNPMVQELV
DYVAGVRDRSYDYIPDDVGLVQSIMSAQMTMFQLASYYAQFYSETSITRY
EGGLAIEFETHRCDKVHDAKFPRSRTNTIPWTFYRDSAYVRINCGLQTSS
NSRKRRTVEAVESTKKKYSRQRRAYVKQLTPNESMFHNGKDSSAPELTRT
CGSRMVSVKTTSYYLTVVFRADDTVGGTGFKMNWTLSQGLEKHPGYVLTS
VIAVDQVGDLSSDTFDFDTLEIGQEHDDHFISDYKLKLTDPSTCPLENDD
TLCYFDSTPSLISKIIAVDMEPALQLPQDAVEVVFEHVFEVDKYPELYES
PKYCLVWDPSTPNTEYGSWTRKSGRLHDTNIERTICRYSKSGIFALGAAV
PPPQVPPLFRFTISWYCGLLFTCVWVILTLVKTNSTKMNVPDWLNTNQLC
GLLVFCCIVLSGMHLELDPIPCSMLSFALYYFGLSVFVWHLLKAAQFTGT
FDKFFRAERNIYTFYFFLGWGIPFFIAGMAGGAEFYPREKKQSCWLAMKG
GSIIGETAPAYFLVVFIFYLYRKGLKRAKMQEDLYNYPKMFGRAVVDATT
LVLFCLTWVFGLFCILHEADFAPQFFFCVFLSCTTIMLCLTAKQNRRSFL
RDYDYEDQDNGKDKYEKHRKFIEEQSDIEDDAVYEERLSKKYFYKWHYQG
AVSFKNLSDYCPLTPLCHRPAGKLSKNFVPGGKIFLNFSPTLKSTLISSP
LEIPCLKIALQNHSHWVF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_034498XLOC_034498Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00054759TCONS_00054759Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000832GPCR_2_secretin-like
IPR000859CUB_dom
IPR017981GPCR_2-like
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Molecular Function
TermDefinition
GO:0004930G-protein coupled receptor activity
GO:0004888transmembrane signaling receptor activity
Vocabulary: Biological Process
TermDefinition
GO:0007186G-protein coupled receptor signaling pathway
GO:0007166cell surface receptor signaling pathway
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007166 cell surface receptor signaling pathway
biological_process GO:0007186 G-protein coupled receptor signaling pathway
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0004930 G-protein coupled receptor activity
molecular_function GO:0004888 transmembrane signaling receptor activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000832GPCR, family 2, secretin-likePFAMPF000027tm_2coord: 447..632
e-value: 9.9E-10
score: 38.0
IPR000859CUB domainGENE3D2.60.120.290coord: 53..239
e-value: 1.6E-6
score: 27.7
IPR000859CUB domainSUPERFAMILY49854Spermadhesin, CUB domaincoord: 186..236
IPR017981GPCR, family 2-likePROSITEPS50261G_PROTEIN_RECEP_F2_4coord: 408..546
score: 13.04

Blast
[Close]
BLAST of TCONS_00054759-protein vs. Swiss-Prot (Human)
Match: AGRD1 (Adhesion G-protein coupled receptor D1 OS=Homo sapiens GN=ADGRD1 PE=1 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.441e-18
Identity = 87/365 (23.84%), Postives = 152/365 (41.64%), Query Frame = 0 
Query:  313 SKIIAVDMEPALQLPQDA-----VEVVFEHVFEVDKYPELYESPK----YCLVWDPSTPNTEYGSWTRKSGRLHDTNIERTICRYSKSGIFALGAAVPPPQVPPLFRFTISW--YCGLLFTCVWVILTLV-----KTNSTKMNVPDWLNTNQLCGLLVFCCIVLSGMHLELDPIPCSMLSFALYYFGLSVFVWHLLKAAQFTGTFDKFFRAERNIYTFYFFLGWGIPFFIAGMAGGAEFYPREKKQSCWLAMKGGSIIGETAPAYFLVVFIFYLYRKGLKRAKMQEDLYNYP--------KMFGRAVVDATTLVLFCLTWVFGLFCILHEADFAPQFFFCVFLSCTTIML----CLTAKQNRRSF 649
            S +I++++ P   L Q+      + V  +H     ++ E   S      YC   D S+     G W+     L   N+  ++CR +    FA+   V P ++    +  +S   Y G   + + ++ TLV      + ST  N    ++ N    +LV   ++L    LE    PC +++  L+YF LS F W L++         K F +E + + +Y+ +GWG P  I  ++            +CWL++  G+I    APA F++V    +    + R   Q    NY         K+  +AV  A  L +   +WVFG+  + +      Q+ F    S   + +    CL   + R +F
Sbjct:  460 SHLISLEVSPPPTLSQNLSGSPLITVHLKHRLTRKQHSEATNSSNRVFVYCAFLDFSSGE---GVWSNHGCALTRGNLTYSVCRCTHLTNFAILMQVVPLELARGHQVALSSISYVGCSLSVLCLVATLVTFAVLSSVSTIRNQRYHIHANLSFAVLVAQVLLLISFRLEPGTTPCQVMAVLLHYFFLSAFAWMLVEGLHLYSMVIKVFGSEDSKHRYYYGMGWGFPLLICIISLSFAMDSYGTSNNCWLSLASGAIWAFVAPALFVIVVNIGIL-IAVTRVISQISADNYKIHGDPSAFKLTAKAV--AVLLPILGTSWVFGVLAV-NGCAVVFQYMFATLNSLQGLFIFLFHCLLNSEVRAAF 817
The following BLAST results are available for this feature:
BLAST of TCONS_00054759-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
AGRD11.441e-1823.84Adhesion G-protein coupled receptor D1 OS=Homo sap... [more]
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