TCONS_00054763-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00054763-protein
Unique NameTCONS_00054763-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length864

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00054763-protein ID=TCONS_00054763-protein|Name=TCONS_00054763-protein|organism=Clytia hemisphaerica|type=polypeptide|length=864bp
VRSDKESLKMGKKKGGKESEVPLKEEFDPVELVTKKPQTVTLMLQSAEES
VLQTVCDSLYKYAEKSQENKAQMVNLGVLEHLPRLISHEDKLVKRSAIMC
IGSMSSENSCKKILRRIGCVKPLLQLLSPDEEIICHEFSTLALSNLAETF
TSKIEIFEQNGLQLLVNHLSSTDCDVQKNTVHAVSLLVEEFQNRAAMKDL
HGFEPLLKLLDSDYPVIQELALSTLITCSQDAENRGALRELEAMNKLVDI
IGNETWSDLHILALQCLANLLEDTETLRAIQTTGVFDKLLAFITGSSSSP
EIQQFTMIVIAAASRLEENRRIFNEQETEKTLITLLTSDNIQVSISAVKA
IAALSENLSSRDKIGRLDGIPNIMKLLSHENEEAREIATLALSNLTNANQ
NNCNILMDKNSLDVIVKLLSDKKYEIQSNTAVLLSNLAMNESWRNEIKKH
GVVKALMEPLKSESEQVQLDACQALAAFLCDVDARNKLLTLDEGILNVVN
LLRSPNGSVQRNAAWVLAMCAVDENIAEEITKYGGLELLQQIQHSSTRKN
PVVDMAWSRLLNNNLPAKYALTGELGFDNTLESLFFDVGKIRGDSQFLPL
PLLFNEEVNNKRPVILVNPKKNATSGSNSKRANKDEEKHTASPSKPASVE
KPEKQRTRTRNDRRMSKSRVGRDNREEPIISGGTNTVSEKPLVETIPSLP
ALSKFVTSISATEDKELLNMVQTVQSTIGGLSDLSEQITSLALFVSDRMG
GNVERSDFTNFSFELHISELKTELASNVIPIGRIKCGIYYHRALLFKVLA
DQIALRCSLMRGEYGRAWNEVQIMERSETGQPILPPKVFVVDLMHNPGEL
FPKGSPEAVKYQRI
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_034500XLOC_034500Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00054763TCONS_00054763Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000225Armadillo
IPR011989ARM-like
IPR016024ARM-type_fold
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0005488binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005488 binding
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000225ArmadilloSMARTSM00185arm_5coord: 190..230
e-value: 150.0
score: 4.2
coord: 357..397
e-value: 9.2
score: 13.5
coord: 399..439
e-value: 0.7
score: 18.9
coord: 66..106
e-value: 0.0021
score: 27.3
coord: 149..189
e-value: 0.46
score: 19.5
coord: 231..272
e-value: 58.0
score: 7.3
coord: 107..148
e-value: 3.8
score: 16.5
coord: 440..480
e-value: 37.0
score: 8.9
coord: 483..522
e-value: 490.0
score: 0.2
IPR000225ArmadilloPROSITEPS50176ARM_REPEATcoord: 368..402
score: 9.992
IPR000225ArmadilloPROSITEPS50176ARM_REPEATcoord: 410..452
score: 9.397
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 451..563
e-value: 8.8E-16
score: 57.4
coord: 296..450
e-value: 5.5E-23
score: 81.1
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 162..295
e-value: 2.4E-19
score: 68.9
coord: 25..161
e-value: 1.3E-18
score: 66.5
NoneNo IPR availablePFAMPF14381EDR1coord: 565..850
e-value: 1.1E-37
score: 129.7
NoneNo IPR availablePFAMPF05804KAPcoord: 143..529
e-value: 3.6E-6
score: 25.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 615..686
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..21
NoneNo IPR availableCDDcd00020ARMcoord: 195..303
e-value: 3.01513E-4
score: 39.22
NoneNo IPR availableCDDcd00020ARMcoord: 71..189
e-value: 1.49174E-13
score: 67.3395
NoneNo IPR availableCDDcd00020ARMcoord: 332..438
e-value: 7.25015E-11
score: 59.6355
NoneNo IPR availableCDDcd00020ARMcoord: 412..518
e-value: 1.99571E-13
score: 66.9543
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 193..548
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 42..255

Blast
[Close]
BLAST of TCONS_00054763-protein vs. Swiss-Prot (Human)
Match: ARMC3 (Armadillo repeat-containing protein 3 OS=Homo sapiens GN=ARMC3 PE=2 SV=2)

HSP 1 Score: 564.303 bits (1453), Expect = 0.000e+0
Identity = 349/880 (39.66%), Postives = 536/880 (60.91%), Query Frame = 0 
Query:   10 MGKKKGGKESEVPLKEEFDPVELVTKKPQTVTLMLQSAEESVLQTVCDSLYKYAEKSQENKAQMVNLGVLEHLPRLISHEDKLVKRSAIMCIGSMSSENSCKKILRRIGCVKPLLQLLSPDEEIICHEFSTLALSNLAETFTSKIEIFEQNGLQLLVNHLSSTDCDVQKNTVHAVSLLVEEFQNRAAMKDLHGFEPLLKLLDSDYPVIQELALSTLITCSQDAENRGALRELEAMNKLVDIIGNETWSDLHILALQCLANLLEDTETLRAIQTTGVFDKLLAFITGSSSSPEIQQFTMIVIAAASRLEENRRIFNEQETEKTLITLLTSDNIQVSISAVKAIAALSENLSSRDKIGRLDGIPNIMKLLSHENEEAREIATLALSNLTNANQNNCNILMDKNSLDVIVKLLSDKKYEIQSNTAVLLSNLAMNESWRNEIKKHGVVKALMEPLKSESEQVQLDACQALAAFLCDVDARNKLLTLDEGILNVVNLLRSPNGSVQRNAAWVLAMCAVDENIAEEITKYGGLELLQQIQHSSTRKNPVVDMAWSRLLNNNLPAKYALTGELGFDNTLESLFFDVGKIRGDSQFLPLPLLFNEEVNNKRPVILVNPKKNATSGSNSKRANKDEEKHTASPSKPASVEKPEKQRTRTRNDRRMSKSRVGRDNREEPIISGGTNTVSEKPLVE-----------------TIPSLPALSKFVTSISATE------DKELLNMVQTVQSTIGGLSDLSEQITSLALFVSDRMGGNVERSDFTNFSFELHISELKTELASNVIPIGRIKCGIYYHRALLFKVLADQIALRCSLMRGEYGRAWNEVQIMERSETG--QPILPPKVFVVDLMHNPGELFPKGSPEAVKYQRI 864
            MGKK   KE E P K+ FDP+ + +KK  TV LML S EE +L   C+++YK+A K +ENK  ++ LG +E L +L++HEDK+V+R+A M  G ++S N  KK+LR +  +  ++  L+P+EE++ HEF++L L+N++  +TSK++IFE  GL+ L+  LSS D DV+KN++  +  LV++FQ RA +++L+   P+L LL S+YPVIQ LAL TL   + D E+R  LR+ + ++ L+ I+  +  +DLHI AL  +AN LED +T+  IQ TG   KLL+F   +S+ P+IQ+     I  A+   ENR++F+EQE EK L+ LL S+N    I+A +AI+A+ EN  S+D      GIP +++LL  +NEE RE A LAL+NLT  N  N N   + + +D ++ LLS K+    +N A +L+N+AM E  R  I+ H ++ A++ PL+S +  VQ  A  A+ A  CDV+AR +L     G+  +V LLRS N  V+++A+W + +CA DE  A E+ + G L++L+++  S TRKN   + A+++LLNNNL  KY+ TG L   N +   F+D G+I   ++ LPL  L  +E ++ R V+L+N K   +  S+ +  +K +  +  S S  +S+ +  K++ +  +    +      +++ EP  + G NTV  K   +                     +  + KFV   S+ +      D +    V  V  +I  ++++ EQI  LA +V+++MGG + +    +FS+ELHISELK +L SNVIPIG +K GI+YHRALLFK LAD+I + CSL+RGEYGRAWNEV +   S  G    +  P+++V+DLM +PG L    S EA  Y+ I
Sbjct:    1 MGKKIK-KEVEPPPKDVFDPLMIESKKAATVVLMLNSPEEEILAKACEAIYKFALKGEENKTTLLELGAVEPLTKLLTHEDKIVRRNATMIFGILASNNDVKKLLRELDVMNSVIAQLAPEEEVVIHEFASLCLANMSAEYTSKVQIFEHGGLEPLIRLLSSPDPDVKKNSMECIYNLVQDFQCRAKLQELNAIPPILDLLKSEYPVIQLLALKTLGVIANDKESRTMLRDNQGLDHLIKILETKELNDLHIEALAVIANCLEDMDTMVQIQQTGGLKKLLSF-AENSTIPDIQKNAAKAITKAAYDPENRKLFHEQEVEKCLVALLGSENDGTKIAASQAISAMCENSGSKDFFNN-QGIPQLIQLLKSDNEEVREAAALALANLTTCNPANANAAAEADGIDPLINLLSSKRDGAIANAATVLTNMAMQEPLRLNIQNHDIMHAIISPLRSANTVVQSKAALAVTATACDVEARTELRN-SGGLEPLVELLRSKNDEVRKHASWAVMVCAGDELTANELCRLGALDILEEVNVSGTRKNKFSEAAYNKLLNNNLSLKYSQTGYLSSSNIINDGFYDYGRINPGTKLLPLKELCLQEPSDLRAVLLINSKSYVSPPSSME--DKSDVGYGRSISSSSSLRRSSKEKNKKNSYHFSAGFGSPIEDKSEP--ASGRNTVLSKSATKEKGWRKSKGKKEEEKVKEEEEVMVVPKFVGEGSSDKEWCPPSDPDFSMYVYEVTKSILPITNIKEQIEDLAKYVAEKMGGKIPKEKLPDFSWELHISELKFQLKSNVIPIGHVKKGIFYHRALLFKALADRIGIGCSLVRGEYGRAWNEVMLQNDSRKGVIGGLPAPEMYVIDLMFHPGGLMKLRSREADLYRFI 872
The following BLAST results are available for this feature:
BLAST of TCONS_00054763-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ARMC30.000e+039.66Armadillo repeat-containing protein 3 OS=Homo sapi... [more]
back to top