TCONS_00054771-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00054771-protein
Unique NameTCONS_00054771-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length867

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00054771-protein ID=TCONS_00054771-protein|Name=TCONS_00054771-protein|organism=Clytia hemisphaerica|type=polypeptide|length=867bp
MGLKPLEFSDCLLDSPYFRDSIHDHEKELDQANGAIKSLIKECQNLIKAL
ENLSKAQASFSGMLQSFKLRYIGEVDVDDEYEYEDAFPAFSSIISKVEEE
RERMLDHVNIQLVEPLEKFRKEQIGRAKDEKKKFDRETDRVCALVESHLK
YSPKKKDTMLSEADTQVELELHKFRELSLEYVTKLQEVNEKKKFELVEII
LAYMYGQSTFYHNGHEVFQDHKNYLTDLQFKLQTTRERFDVTKIEAQDLK
EKTKKRFAVGDLHKGAGYSRQGYLLVHDKRKSVLGPQWVKHYCSYTKENK
ILTMVPYTQTNTKLNANTDTIIVTSCTRRPTESSERRFLFDITGQDRSQP
LTMQCLSEDDRKLWLEVMEGKEPIYMESNELKQNDGVTNLDQTGLQFILK
CMEGIERRGLTDQGIYRIAGVSSKFNKLLNTGIDPKQIDRLDLTTDESPW
EVKTITSAMKQYFRNLSEPVFTFKLHDDFLSTLKLETAEKKVAKLKELVN
QLPNDRGNVLNRLMYHLKLVAGQSKQNLMQESNLGVVLGPTLMRSREETM
AAIMSIKFQSIVIETMIKEYDQIFTDGPPQSLLSSISSNNNNNTAAPLNV
PANPIAPRSPGRNSKKRAPEPPTAATKPVVKSRSEGEPVGGKPPPPERPQ
PYAAGRPDQKEILKKQHSTPANNPIKPKYPPPGRPPNLGGSLKRWPHLAA
RPSPNGKPLIPLNGDDKIRLAETVTPFTSPPEDDSEAKSRRNSYAKAMDK
IVKSVDVAESGGAPPLKSPPPISQKPKLQSIQQSSAPFANNQIPPKPGVP
PPQVPKRKEWKVRALYDCIAENTSELSFNKGAIITNVKSSTEEGWLIGTL
NGRSGFVPENYCEKFED
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_034501XLOC_034501Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00054771TCONS_00054771Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001452SH3_domain
IPR000198RhoGAP_dom
IPR011993PH_dom-like
IPR001849PH_domain
IPR027267AH/BAR-dom
IPR008936Rho_GTPase_activation_prot
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: Biological Process
TermDefinition
GO:0007165signal transduction
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007165 signal transduction
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 232..252
NoneNo IPR availableCOILSCoilCoilcoord: 22..56
NoneNo IPR availableCOILSCoilCoilcoord: 485..505
NoneNo IPR availablePFAMPF16746BAR_3coord: 6..249
e-value: 5.4E-69
score: 232.4
NoneNo IPR availableGENE3D1.10.555.10coord: 391..586
e-value: 1.4E-46
score: 157.8
NoneNo IPR availableGENE3D2.30.30.40coord: 663..867
e-value: 4.7E-18
score: 64.2
NoneNo IPR availableGENE3D1.20.1270.60coord: 1..258
e-value: 1.8E-42
score: 145.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 584..806
NoneNo IPR availableCDDcd07602BAR_RhoGAP_OPHN1-likecoord: 19..225
e-value: 1.18608E-98
score: 307.705
NoneNo IPR availableCDDcd01249BAR-PH_GRAF_familycoord: 269..375
e-value: 1.08519E-48
score: 167.123
IPR001452SH3 domainSMARTSM00326SH3_2coord: 810..866
e-value: 1.0E-15
score: 68.2
IPR001452SH3 domainPFAMPF14604SH3_9coord: 814..861
e-value: 6.3E-11
score: 41.9
IPR001452SH3 domainPROSITEPS50002SH3coord: 807..867
score: 13.188
IPR001452SH3 domainSUPERFAMILY50044SH3-domaincoord: 786..865
IPR000198Rho GTPase-activating protein domainSMARTSM00324RhoGAP_3coord: 392..571
e-value: 2.2E-47
score: 173.4
IPR000198Rho GTPase-activating protein domainPFAMPF00620RhoGAPcoord: 397..548
e-value: 5.9E-35
score: 120.2
IPR000198Rho GTPase-activating protein domainPROSITEPS50238RHOGAPcoord: 388..574
score: 38.212
IPR011993PH domain-likeGENE3D2.30.29.30coord: 261..380
e-value: 1.1E-9
score: 37.4
IPR011993PH domain-likeSUPERFAMILY50729PH domain-likecoord: 268..369
IPR001849Pleckstrin homology domainPFAMPF00169PHcoord: 270..366
e-value: 5.2E-6
score: 26.8
IPR001849Pleckstrin homology domainPROSITEPS50003PH_DOMAINcoord: 267..373
score: 8.489
IPR027267Arfaptin homology (AH) domain/BAR domainSUPERFAMILY103657BAR/IMD domain-likecoord: 5..293
IPR008936Rho GTPase activation proteinSUPERFAMILY48350GTPase activation domain, GAPcoord: 397..576

Blast
[Close]
BLAST of TCONS_00054771-protein vs. Swiss-Prot (Human)
Match: RHG26 (Rho GTPase-activating protein 26 OS=Homo sapiens GN=ARHGAP26 PE=1 SV=1)

HSP 1 Score: 534.258 bits (1375), Expect = 4.244e-178
Identity = 270/583 (46.31%), Postives = 386/583 (66.21%), Query Frame = 0 
Query:    1 MGLKPLEFSDCLLDSPYFRDSIHDHEKELDQANGAIKSLIKECQNLIKALENLSKAQASFSGMLQSFKLRYIGEVDVDDEYEYEDAFPAFSSIISKVEEERERMLDHVNIQLVEPLEKFRKEQIGRAKDEKKKFDRETDRVCALVESHLKYSPKKKDTMLSEADTQVELELHKFRELSLEYVTKLQEVNEKKKFELVEIILAYMYGQSTFYHNGHEVFQDHKNYLTDLQFKLQTTRERFDVTKIEAQDLKEKTKKRFAVGDLHKGAG-YSRQGYLLVHDKRKSVLGPQWVKHYCSYTKENKILTMVPYTQTNTKLNANTDTIIVTSCTRRPTESSERRFLFDITGQDRSQPLTMQCLSEDDRKLWLEVMEGKEPIYMESNELKQNDGVTNLDQTGLQFILKCMEGIERRGLTDQGIYRIAGVSSKFNKLLNTGIDPKQIDRLDLTTDESPWEVKTITSAMKQYFRNLSEPVFTFKLHDDFLSTLKLETAEKKVAKLKELVNQLPNDRGNVLNRLMYHLKLVAGQSKQNLMQESNLGVVLGPTLMRSREETMAAIMSIKFQSIVIETMIKEYDQIFTDGPPQSL 582
            MGL  LEFSDC LDSP+FR+++  HE ELD+ N  IK LIK+ ++LI AL+NLS A+  F+  L  FK + IG+ + DDE     +   F++++  +E+ER RM+++ +  L+ PLEKFRKEQIG AK+ KKK+D+ET++ C ++E HL  S KKK++ L EAD+QV+L    F E+SLEYV K+QEV E+K FE VE +LA++ G  TFYH+G+E+ +D  ++ T L   +Q TR RF+ T+ E + L +K K+       HK    Y+ +GYL V +KR    G  WVKHYC+Y +++K +TMVP+ Q +       +++I+ SCTRR T+S E+RF FD+   DR   +TMQ LSE+DR+LW+E M+G+EP+Y  SN+  Q++G   LD  G   I KC+  +E RG+ +QG+YRI GV+S+  KLL+  +DPK     + T   + WE+KTITSA+K Y R L  P+  ++    F+   KLE  E +V+++  LV++LP     +L  LM HL  VA   KQNLM  +NLGVV GPTL+R +EET+AAIM IKFQ+IVIE +I+ +++IF   P   L
Sbjct:    1 MGLPALEFSDCCLDSPHFRETLKSHEAELDKTNKFIKELIKDGKSLISALKNLSSAKRKFADSLNEFKFQCIGDAETDDEMCIARSLQEFATVLRNLEDERIRMIENASEVLITPLEKFRKEQIGAAKEAKKKYDKETEKYCGILEKHLNLSSKKKESQLQEADSQVDLVRQHFYEVSLEYVFKVQEVQERKMFEFVEPLLAFLQGLFTFYHHGYELAKDFGDFKTQLTISIQNTRNRFEGTRSEVESLMKKMKENPLE---HKTISPYTMEGYLYVQEKRH--FGTSWVKHYCTYQRDSKQITMVPFDQKSGGKGGEDESVILKSCTRRKTDSIEKRFCFDVEAVDRPGVITMQALSEEDRRLWMEAMDGREPVY-NSNKDSQSEGTAQLDSIGFSIIRKCIHAVETRGINEQGLYRIVGVNSRVQKLLSVLMDPKTASETE-TDICAEWEIKTITSALKTYLRMLPGPLMMYQFQRSFIKAAKLENQESRVSEIHSLVHRLPEKNRQMLQLLMNHLANVANNHKQNLMTVANLGVVFGPTLLRPQEETVAAIMDIKFQNIVIEILIENHEKIFNTVPDMPL 576
The following BLAST results are available for this feature:
BLAST of TCONS_00054771-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
RHG264.244e-17846.31Rho GTPase-activating protein 26 OS=Homo sapiens G... [more]
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