TCONS_00054822-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00054822-protein
Unique Name	TCONS_00054822-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1200

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00054822-protein ID=TCONS_00054822-protein|Name=TCONS_00054822-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1200bp
MYGSDCAVPVAADKRRGGPNEELVRRESKSLLENYGSVPGSDEGNDMVDK
GGGNKNERQISIHNRIIPHKKFCSNKISTAKYNLATFFPKFLLEQFTRYA
NLFFLLIALLQQIPNVSPTGRYTTAIPLLIVLSCSAVKEIIEDFNRHRQD
DQINNRLVEVVRNDEFVKIRWTKVMVGDLVKIGNGEFFPADLILIASSEP
MGMCYIETANLDGETNLKIRQALPLTAGITSKQLAVQLRGQIVCEGPNNR
LYDFVGNIRANDQEGVPLSSDQVLLRGAQLRNTQWIYGVVVYTGHESKLL
QNATAAPIKRSNVDHTTNLQILFLFGLLITLAFFSAIGSIVWTSDHEKDW
YFGFQETSAQNFGFTFLTFFILYNNLIPISLPVTLEVVKFIQAQFINWDM
KMYYEPSDTPAMARTSNLNEELGQVKYIFSDKTGTLTRNIMELKKLSIAG
KVYSLFEKGKEGEELSSQLSLAMRTEEQKENIQDFVSLLSVCHTVVPERD
SEDSTHIIYQGASPDEEALVKGSVQMGCRFTTRTPTAVIIDVERNGERVD
RIYEILNVLEFNSTRKRMSVIVKTPEGQIKVMTKGADNVIFERLAEHQNE
MVEQTLQHLRDFANEGLRTLCIAYADLDPQEYEEWNMLFHKASLEIDNRD
TKVAEVAELIEKNLTLMGATAIEDKLQDEVPESIAKLSQANIKIWVLTGD
KQETAINIGFSCKLLTRHLELLICEEGSTREQVKQWINSKIDQYHIERFQ
PDEQSIWPKFLQRLPCFRPKKPKREASVIKDLALIMTGSNIHHALSEEVK
EDFLDLALVCRAVVACRVSPLQKSLLVQLVKENVQGAITLAVGDGANDVS
MIQSAHVGVGISGQEGLQAAGASDYAIAQFKYLNRLLLVHGAFSYQRLAK
LILYSFYKNICLYVIELWFATVNGFSGQILFDKWCIGLYNVIFTFLPPLA
FGLFDRTCSETAREKVPKLYKNSQQSDLFNVKVFWLWIGTAIMHSIILYY
LPAYVFKFDTPFGDGSTVGQWFVGNVVYTCVVIAVCLKAAIELDTWNILS
HFAIWGSIGSWFLFLLIYCRPFIAMTLAPNMIGQDMMLYSCPTFWLTILC
IPVITLAPDFLYHAFQREFKKNTRQRIQEIELSGDDPANWTLDDNGFPIV
YREPRERVGTNASIQSNHGFAFNTAEKPKGILMNDVMLKTDSTFTKPTGN

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_034535	XLOC_034535	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00054822	TCONS_00054822	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001757	P_typ_ATPase
IPR032631	P-type_ATPase_N
IPR023299	ATPase_P-typ_cyto_domN
IPR023214	HAD-like_dom
IPR006539	P-type_ATPase_IV
IPR032630	P_typ_ATPase_c
IPR018303	ATPase_P-typ_P_site
IPR023298	ATPase_P-typ_TM_dom
IPR008250	ATPase_P-typ_transduc_dom_A

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

Vocabulary: **Molecular Function**
Term	Definition
GO:0000166	nucleotide binding
GO:0005524	ATP binding
GO:0000287	magnesium ion binding
GO:0004012	phospholipid-translocating ATPase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0015914	phospholipid transport

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015914	phospholipid transport
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0000287	magnesium ion binding
molecular_function	GO:0000166	nucleotide binding
molecular_function	GO:0004012	phospholipid-translocating ATPase activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00119	CATATPASE	coord: 842..861 score: 38.16 coord: 429..443 score: 62.86
None	No IPR available	PFAM	PF13246	Cation_ATPase	coord: 512..594 e-value: 4.7E-11 score: 42.5
None	No IPR available	PFAM	PF00122	E1-E2_ATPase	coord: 155..388 e-value: 1.1E-7 score: 31.4
None	No IPR available	GENE3D	2.70.150.10		coord: 115..306 e-value: 2.7E-42 score: 143.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..55
IPR001757	P-type ATPase	TIGRFAM	TIGR01494	TIGR01494	coord: 809..925 e-value: 5.1E-29 score: 99.0 coord: 359..451 e-value: 5.1E-19 score: 66.0
IPR032631	P-type ATPase, N-terminal	PFAM	PF16209	PhoLip_ATPase_N	coord: 65..124 e-value: 1.6E-25 score: 88.5
IPR023299	P-type ATPase, cytoplasmic domain N	GENE3D	3.40.1110.10		coord: 387..441 e-value: 7.4E-6 score: 24.7 coord: 442..668 e-value: 4.1E-65 score: 218.8
IPR023299	P-type ATPase, cytoplasmic domain N	SUPERFAMILY	81660	Metal cation-transporting ATPase, ATP-binding domain N	coord: 436..672
IPR023214	HAD-like domain	GENE3D	3.40.50.1000		coord: 669..882 e-value: 5.2E-46 score: 156.0
IPR023214	HAD-like domain	SUPERFAMILY	56784	HAD-like	coord: 417..441 coord: 619..726 coord: 805..886
IPR006539	P-type ATPase, subfamily IV	TIGRFAM	TIGR01652	TIGR01652	coord: 72..1129 e-value: 0.0 score: 1302.9
IPR032630	P-type ATPase, C-terminal	PFAM	PF16212	PhoLip_ATPase_C	coord: 871..1121 e-value: 9.1E-84 score: 281.0
IPR018303	P-type ATPase, phosphorylation site	PROSITE	PS00154	ATPASE_E1_E2	coord: 431..437
IPR023298	P-type ATPase, transmembrane domain	SUPERFAMILY	81665	Calcium ATPase, transmembrane domain M	coord: 891..1121 coord: 69..159 coord: 304..423
IPR008250	P-type ATPase, A domain	SUPERFAMILY	81653	Calcium ATPase, transduction domain A	coord: 155..226 coord: 262..303

Blast

[Close]

BLAST of TCONS_00054822-protein vs. Swiss-Prot (Human)
Match: AT8A1 (Phospholipid-transporting ATPase IA OS=Homo sapiens GN=ATP8A1 PE=1 SV=1)

HSP 1 Score: 1164.83 bits (3012), Expect = 0.000e+0
Identity = 596/1157 (51.51%), Postives = 779/1157 (67.33%), Query Frame = 0

Query:   71 KFCSNKISTAKYNLATFFPKFLLEQFTRYANLFFLLIALLQQIPNVSPTGRYTTAIPLLIVLSCSAVKEIIEDFNRHRQDDQINNRLVEVVRNDEFVKIRWTKVMVGDLVKIGNGEFFPADLILIASSEPMGMCYIETANLDGETNLKIRQALPLTAGITSKQLAVQLRGQIVCEGPNNRLYDFVGNIRANDQEGVPLSSDQVLLRGAQLRNTQWIYGVVVYTGHESKLLQNATAAPIKRSNVDHTTNLQILFLFGLLITLAFFSAIGSIVWTSDHE-KDWYFGFQETSAQNFGFTFLTFFILYNNLIPISLPVTLEVVKFIQAQFINWDMKMYYEPSDTPAMARTSNLNEELGQVKYIFSDKTGTLTRNIMELKKLSIAGKVYSL-------------FEKGKEGEEL----SSQLSLAMRTEEQKENIQDFVSLLSVCHTVVPERDSEDSTHIIYQGASPDEEALVKGSVQMGCRFTTRTPTAVIIDVERNGERVDRIYEILNVLEFNSTRKRMSVIVKTPEGQIKVMTKGADNVIFERLAEHQNEMVEQTLQHLRDFANEGLRTLCIAYADLDPQEYEEWNMLFHKASLEIDNRDTKVAEVAELIEKNLTLMGATAIEDKLQDEVPESIAKLSQANIKIWVLTGDKQETAINIGFSCKLLTRHLELLICEEGS---TREQVKQWINSKIDQYHIERFQPDEQSIWPKFLQRLPCFRPKKPKREASVIKDLALIMTGSNIHHALSEEVKEDFLDLALVCRAVVACRVSPLQKSLLVQLVKENVQGAITLAVGDGANDVSMIQSAHVGVGISGQEGLQAAGASDYAIAQFKYLNRLLLVHGAFSYQRLAKLILYSFYKNICLYVIELWFATVNGFSGQILFDKWCIGLYNVIFTFLPPLAFGLFDRTCSETAREKVPKLYKNSQQSDLFNVKVFWLWIGTAIMHSIILYYLPAYVFKFDTPFGDGSTVGQWFVGNVVYTCVVIAVCLKAAIELDTWNILSHFAIWGSIGSWFLFLLIYCRPFIAMTLAPNMIGQDMMLYSCPTFWLTILCIPVITLAPDFLYHAFQREFKKNTRQRIQEIELSGDDPANWTLDDN------GFPIVYREPRERVGTNASIQSN--HGFAFNTAEKPKGIL-MNDVMLKTDSTFTKP 1197
            KFC+N +STAKYN+ TF P+FL  QF R AN FFL IALLQQIP+VSPTGRYTT +PLL +L+ +A+KEIIED  RH+ D+ +N +  +V+RN  +  + W KV VG++VK+ NGE  PADLI ++SSEP  MCYIET+NLDGETNLKIRQ LP T+ I      +++ G+I CE PN  LYDFVGNIR +    VPL +DQ+LLRGAQLRNTQW++G+VVYTGH++KL+QN+T+ P+K SNV+  TN+QIL LF +LI ++   ++GS +W   H  KDWY       A NFG  FLTF IL+NNLIPISL VTLEVVKF QA FINWD+ M+YEP+DT AMARTSNLNEELGQVKYIFSDKTGTLT N+M+ KK +IAG  Y               ++  + G+E     SS L            I +F+++++VCHT VPER+ +    IIYQ ASPDE ALV+ + Q+   FT RTP +VIID     ER    YE+LNVLEF S RKRMSVIV+TP G++++  KGAD VI++RLAE  ++  E TL+HL  FA EGLRTLC A A++   +++EW  ++ +AS  + NR  K+ E  ELIEKNL L+GATAIEDKLQD+VPE+I  L +A+IKIW+LTGDKQETAINIG SCKLL +++ +++  EGS   TRE + +   +  D    E                                 D ALI+ G  + +AL+  V++ FLDLAL C+AV+ CRVSPLQKS +V++VK+ V+  +TLA+GDGANDVSMIQ+AHVGVGISG EGLQAA +SDY+IAQFKYL  LL++HGA++Y R++K ILY FYKNI LY+IE+WFA VNGFSGQILF++WCIGLYNV+FT +PPL  G+F+R+C +    K P+LYK SQ +  FN KVFW+     + HS+IL++ P    ++ T FG+G T     +GN VYT VVI VCLKA +E   W   SH AIWGSI  W +F  IY   + A+ +AP+M G+  ML+S   FW+ +L IPV +L  D +Y   +R   K     +QE+E    DP    L  +          V+++    +  + S+Q N  HG+AF+  E   GI+  ++V+   D+T  +P
Sbjct:   48 KFCNNHVSTAKYNIITFLPRFLYSQFRRAANSFFLFIALLQQIPDVSPTGRYTTLVPLLFILAVAAIKEIIEDIKRHKADNAVNKKQTQVLRNGAWEIVHWEKVAVGEIVKVTNGEHLPADLISLSSSEPQAMCYIETSNLDGETNLKIRQGLPATSDIKDVDSLMRISGRIECESPNRHLYDFVGNIRLDGHGTVPLGADQILLRGAQLRNTQWVHGIVVYTGHDTKLMQNSTSPPLKLSNVERITNVQILILFCILIAMSLVCSVGSAIWNRRHSGKDWYLNLNYGGASNFGLNFLTFIILFNNLIPISLLVTLEVVKFTQAYFINWDLDMHYEPTDTAAMARTSNLNEELGQVKYIFSDKTGTLTCNVMQFKKCTIAGVAYGHVPEPEDYGCSPDEWQNSQFGDEKTFSDSSLLENLQNNHPTAPIICEFLTMMAVCHTAVPEREGDK---IIYQAASPDEGALVRAAKQLNFVFTGRTPDSVIIDSLGQEER----YELLNVLEFTSARKRMSVIVRTPSGKLRLYCKGADTVIYDRLAE-TSKYKEITLKHLEQFATEGLRTLCFAVAEISESDFQEWRAVYQRASTSVQNRLLKLEESYELIEKNLQLLGATAIEDKLQDQVPETIETLMKADIKIWILTGDKQETAINIGHSCKLLKKNMGMIVINEGSLDGTRETLSRHCTTLGDALRKE--------------------------------NDFALIIDGKTLKYALTFGVRQYFLDLALSCKAVICCRVSPLQKSEVVEMVKKQVK-VVTLAIGDGANDVSMIQTAHVGVGISGNEGLQAANSSDYSIAQFKYLKNLLMIHGAWNYNRVSKCILYCFYKNIVLYIIEIWFAFVNGFSGQILFERWCIGLYNVMFTAMPPLTLGIFERSCRKENMLKYPELYKTSQNALDFNTKVFWVHCLNGLFHSVILFWFPLKALQYGTAFGNGKTSDYLLLGNFVYTFVVITVCLKAGLETSYWTWFSHIAIWGSIALWVVFFGIYSSLWPAIPMAPDMSGEAAMLFSSGVFWMGLLFIPVASLLLDVVYKVIKRTAFKTLVDEVQELEAKSQDPGAVVLGKSLTERAQLLKNVFKKNHVNLYRSESLQQNLLHGYAFSQDE--NGIVSQSEVIRAYDTTKQRP 1161

The following BLAST results are available for this feature:

BLAST of TCONS_00054822-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00054822-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
AT8A1	0.000e+0	51.51	Phospholipid-transporting ATPase IA OS=Homo sapien...	[more]

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TCONS_00054822-protein (polypeptide) - C. hemisphaerica