TCONS_00054901-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00054901-protein
Unique NameTCONS_00054901-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1364

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00054901-protein ID=TCONS_00054901-protein|Name=TCONS_00054901-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1364bp
MLEESVYKQFLERCASFTGNELKDQSAIHKDDIRKHVYQVIWSGLKNEVT
DIVPVLKEAAKSNERLISMFADVLAVIDAEVICLEEKKIRENFISLLSFI
ANVIPESVLKVRLDPETLELAELIPNQKTFNGKLVKTKTRLFYKQQKFNL
FREETEGYAKLITELTSNELGRSSKDSVMQNIFSLLGFFNLDPNRVLDVL
LEAFECRVDEDLVFVPLITEYLKHCNVSGFCHLIGFKFQYYHQSMDSKTP
ESLYRLTACLLRNDLIQLEQLYPHLKPSESEIADLSKKHMQSAHEEAKKL
TAVILSGTPEDEDKTLDLKDDPMDIDNQKFGLCLALLQSGAWKNALTIMN
QLPTSYFLSLPNVSKSICNLIHCTIEPLYRSKLCPKGALGNVYRSQRGFP
QPCLQYSQLTDDVFPMLFKLGPNLSYDPVLFVKVVRVAKGFIKEYSQASD
ILKEGLKQVYAGVLSLIDEVLFPSLSLLDCNCCIAEELYGLVKRLPYEQR
YHLYALWKNYSYYTHPLLIVVKAKTIKRAKYITKRLSKENVKQSGRQIGK
LSHSNPCVLFDHLLDQIQRYDNFIGPMVDSLKYLNPLAYDVMTFCVIEAL
ANPDKQRMKQSDTNLSPWLQSLSQFCGAVFKKYPTDITGLLQYIANQLKA
GKSLDLLVLKEVVQKMSGVEANDEITPQQLEALAGGELLRAEGAYFGQIR
NTRKPSARLRDALIEGNLTIPLCLLIAQQRNAIVYVEQEAGHLKLVGKLY
DQCQDNLIQFGGFLSLQLGNHDYQSALPTLDEFHNTYGITPDISYFLKRP
FYQRQIQEKMSTIKQEMADQKESRRGTELMNSKFCEACDGIFRPVVEASI
NLQQSKIWNNLSPLLYVTFWSLSMYDLYTPSDRYDEEKAKLKKSINEIDD
NKEFTSSSKKKKEIERCKLLIEKLEEEKKAQLEHNKLVLTWMESRKDSWF
PSKIAKGETITQFLQLCVFPRCVFSAVDAMYCAKFIQTVHSLAAPNFSTL
ICFDRTFSDVSYIVASLTENEASRYGRFLCAMLQMVMRWHKDKKLYESEC
ANCPGFLTVLRATNVEKALYLDYENFRHVCHKWQYKLTKALILGIESKDY
TQIRNTLLVLIKILPYYPQVLNLGQALERRIEKIIEEEKDSRPDLQALAT
GYNGMLKAKKSTMIPEGEFHLKEKETPKQQKIIPPSKIKTEPVDETTKSE
KKKEDSQKKSSKERERGNSSEKKSSKETSSSSQASVSIKSEREKTLIDED
GDRKKTSRSPKLASSERSGSKNDEKIERKEKLKERAVGKEKEKRPRTSSP
PNEEKKRKVDDYPVSPANTSSSKKEKEKSEKKSERKRTSMDADLKETKRR
KDESSHAKTKSKKH
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_034595XLOC_034595Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00054901TCONS_00054901Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021418THO_THOC2_C
IPR032302THOC2_N
IPR021726THO_THOC2_N
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 803..823
NoneNo IPR availableCOILSCoilCoilcoord: 907..934
NoneNo IPR availableCOILSCoilCoilcoord: 881..901
NoneNo IPR availableCOILSCoilCoilcoord: 1272..1292
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1169..1364
IPR021418THO complex, subunitTHOC2, C-terminalPFAMPF11262Tho2coord: 858..1156
e-value: 1.5E-97
score: 326.3
IPR032302THO complex subunit 2, N-terminal domainPFAMPF16134THOC2_Ncoord: 27..381
e-value: 1.1E-53
score: 182.8
coord: 411..546
e-value: 2.2E-23
score: 82.7
IPR021726THO complex, subunitTHOC2, N-terminalPFAMPF11732Thoc2coord: 548..623
e-value: 6.0E-33
score: 112.7

Blast
BLAST of TCONS_00054901-protein vs. Swiss-Prot (Human)
Match: THOC2 (THO complex subunit 2 OS=Homo sapiens GN=THOC2 PE=1 SV=2)

HSP 1 Score: 1241.48 bits (3211), Expect = 0.000e+0
Identity = 636/1244 (51.13%), Postives = 836/1244 (67.20%), Query Frame = 0
Query:    3 EESVYKQFLERCASFTGNELKDQSAIH--KDDIRKHVYQVIWSGLKNEVTDIVPVLKEAAKSNERLISMFADVLAVIDAEVICLEEKKIRENFISLLSFIANVIPESVLKVRLDPETLELAELIPNQKTFNGKLVKTKTRLFYKQQKFNLFREETEGYAKLITELTSNELGRSSKDSVMQNIFSLLGFFNLDPNRVLDVLLEAFECRVDEDLVFVPLITEYLKHCNVSGFCHLIGFKFQYYHQSMDSKTPESLYRLTACLLRNDLIQLEQLYPHLKPSESEIADLSKKHMQSAHEEAKKLTAVILSGTPEDEDKTLDLKDDPMDI---DNQKFGLCLALLQSGAWKNALTIMNQLPTSYFLSLPNVSKSICNLIHCTIEPLYRSKLCPKGALG---NVYRSQRGFPQPCLQYSQLTDDVFPMLFKLGPNLSYDPVLFVKVVRVAKGFIKEY----SQASDILKEGLKQVYAGVLSLIDEVLFPSLSLLDCNCCIAEELYGLVKRLPYEQRYHLYALWKNYSYYTHPLLIVVKAKTIKRAKYITKRLSKENVKQSGRQIGKLSHSNPCVLFDHLLDQIQRYDNFIGPMVDSLKYLNPLAYDVMTFCVIEALANPDKQRMKQSDTNLSPWLQSLSQFCGAVFKKYPTDITGLLQYIANQLKAGKSLDLLVLKEVVQKMSGVEANDEITPQQLEALAGGELLRAEGAYFGQIRNTRKPSARLRDALIEGNLTIPLCLLIAQQRNAIVYVEQEAGHLKLVGKLYDQCQDNLIQFGGFLSLQLGNHDYQSALPTLDEFHNTYGITPDISYFLKRPFYQRQIQEKMSTIKQEMADQKESRRGTELMNSKFCEACDGIFRPVVEASINLQQSKIWNNLSPLLYVTFWSLSMYDLYTPSDRYDEEKAKLKKSINEIDDNKEFTSSSKKKKEIERCKLLIEKLEEEKKAQLEHNKLVLTWMESRKDSWFPSKIAKGETITQFLQLCVFPRCVFSAVDAMYCAKFIQTVHSLAAPNFSTLICFDRTFSDVSYIVASLTENEASRYGRFLCAMLQMVMRWHKDKKLYESECANCPGFLTVLRATNVE---KALYLDYENFRHVCHKWQYKLTKALILGIESKDYTQIRNTLLVLIKILPYYPQVLNLGQALERRIEKIIEEEKDSRPDLQALATGYNGMLKAKKSTMIPEGEFHLKEKETPKQQKIIPPSKIKTEPVDETTKSEKKKEDSQKKSSKERERGNSSEKKSSKETSSS 1231
            E+S   +FL  C   + N+  D S     +  + +  Y VI   LK+E      VL + ++  E + S+ ADV  ++D E  CLEEK  R+ F  L+     ++ ++VLK RLDPETLE   LI   + FN K VK KT+LFYKQQKFNL REE EGYAKLI EL  +  G  + D +++NI SL+G FNLDPNRVLDV+LE FECR + D  F+ L+  Y+  C     CH++GFKF++Y Q  + +TP SLYR+ A LL+ +LI L+ LY HL P+++ I D  K+ +  A +  +KLT V+LS    DE +    K++       DNQK GL  ALL+ G W++A  IM+Q+P  Y  S   ++ +IC LIH TIEPLYR    PKGA G   N  +++R  P+    +  L  DVF M   LGP+LS+DP+LF KVVR+ K F+KE+    S+  D  KE  + + + +LS+ D+VL PSLSL+DCN C++EEL+G+ K  PY+ RY LY  WKN +Y +HPLL+ VKA+TI RAKYI KRL+KENVK SGRQIGKLSHSNP +LFD++L QIQ+YDN I P+VDSLKYL  L YDV+ +C+IEALANP+K+RMK  DT +S WLQSL+ FCGAVF+KYP D+ GLLQY+ANQLKAGKS DLL+LKEVVQKM+G+E  +E+T +QLEA+ GGE L+AEG YFGQIRNT+K S RL+DAL++ +L +PLCLL+AQQRN +++ E    HLKLVGKLYDQC D L+QFGGFL+  L   DY   +P++D   N +    D ++FL RP Y   I  K   +K+     K+  +       K+  +C+ +  PV EA ++L  SK+W+++SP  Y TFWSL+MYDL  P   Y+ E  KLK  +  IDDN+E   + KKK++ ERC  L +KL EE+K Q+EH + VL  ++  KD+W  +K  K ETIT+FLQLC+FPRC+FSA+DA+YCA+F++ VH    PNFSTL+C+DR FSD+ Y VAS TENEASRYGRFLC ML+ V RWH D+  YE EC N PGFLT+LRAT  +   KA  LDYENFRHV HKW YKLTKA +  +E+ +YT IRN L+VL KILP+YP+VLNLGQALERR+ KI +EEK+ RPDL ALA GY+G LK++KS MIPE EFH K+         +               + K  E S +++ K RER     K  +K +S++
Sbjct:   17 EKSGRGEFLHLCRILSENKSHDSSTYRDFQQALYELSYHVIKGNLKHEQAS--NVLSDISEFREDMPSILADVFCILDIETNCLEEKSKRDYFTQLVLACLYLVSDTVLKERLDPETLESLGLIKQSQQFNQKSVKIKTKLFYKQQKFNLLREENEGYAKLIAELGQDLSGSITSDLILENIKSLIGCFNLDPNRVLDVILEVFECRPEHDDFFISLLESYMSMCEPQTLCHILGFKFKFY-QEPNGETPSSLYRVAAVLLQFNLIDLDDLYVHLLPADNCIMDEHKREIAEAKQIVRKLTMVVLSSEKMDEREKEKEKEEEKVEKPPDNQKLGLLEALLKIGDWQHAQNIMDQMPPYYAASHKLIALAICKLIHITIEPLYRRVGVPKGAKGSPVNALQNKRA-PKQAESFEDLRRDVFNMFCYLGPHLSHDPILFAKVVRIGKSFMKEFQSDGSKQED--KEKTEVILSCLLSITDQVLLPSLSLMDCNACMSEELWGMFKTFPYQHRYRLYGQWKNETYNSHPLLVKVKAQTIDRAKYIMKRLTKENVKPSGRQIGKLSHSNPTILFDYILSQIQKYDNLITPVVDSLKYLTSLNYDVLAYCIIEALANPEKERMKHDDTTISSWLQSLASFCGAVFRKYPIDLAGLLQYVANQLKAGKSFDLLILKEVVQKMAGIEITEEMTMEQLEAMTGGEQLKAEGGYFGQIRNTKKSSQRLKDALLDHDLALPLCLLMAQQRNGVIFQEGGEKHLKLVGKLYDQCHDTLVQFGGFLASNLSTEDYIKRVPSIDVLCNEFHTPHDAAFFLSRPMYAHHISSKYDELKKSEKGSKQQHKV-----HKYITSCEMVMAPVHEAVVSLHVSKVWDDISPQFYATFWSLTMYDLAVPHTSYEREVNKLKVQMKAIDDNQEMPPNKKKKEK-ERCTALQDKLLEEEKKQMEHVQRVLQRLKLEKDNWLLAKSTKNETITKFLQLCIFPRCIFSAIDAVYCARFVELVHQQKTPNFSTLLCYDRVFSDIIYTVASCTENEASRYGRFLCCMLETVTRWHSDRATYEKECGNYPGFLTILRATGFDGGNKADQLDYENFRHVVHKWHYKLTKASVHCLETGEYTHIRNILIVLTKILPWYPKVLNLGQALERRVHKICQEEKEKRPDLYALAMGYSGQLKSRKSYMIPENEFHHKDPPPRNAVASVQNGPGGGPSSSSIGSASKSDESSTEETDKSRERSQCGVKAVNKASSTT 1248          
The following BLAST results are available for this feature:
BLAST of TCONS_00054901-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
THOC20.000e+051.13THO complex subunit 2 OS=Homo sapiens GN=THOC2 PE=... [more]
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