TCONS_00055217-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00055217-protein
Unique NameTCONS_00055217-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length898

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00055217-protein ID=TCONS_00055217-protein|Name=TCONS_00055217-protein|organism=Clytia hemisphaerica|type=polypeptide|length=898bp
NISGYIFFYKESFEPSSSYRGIATKDFLIILNNLKINTEYVFRILAYNDI
GNGIPTQQYSLGTTQNNFKGPSKIVLNLQADATSFSTIQTTWDLDPSEEN
SISGYHVTYTGNDTTNQRTVFHPSTSIGLEDLEQWTDYVIEVCSFNSFGQ
SPCQTTAATTLMKDGLPEVKVSGLEQIYKTHNEIHVSWLPLATTITEDLI
GYHVKIWLYKQDGRFVVGSSVVEESVSLAVNSFRFSSLESNSIYKVSVSV
ENTRGKGQETLIEASTCACEEIIYTNFFVQPPYTSIDVNSQSFELQYNGL
FPDLLKKIIPETCGVCQMTSTQNYTTQLSLKSNGNSGLAFKRKYQRVLDD
IDSTSKITFPMTSSPNDQSKFVSIIDYPGAVLLNRKVDSEELVHQILQKL
SSCWTIVFIYLLLCVLSALVLWGLDHFSFSTNQQFAKSLADGLKETFYYA
FITQSTVGYGDMVVKTKRARCFIMFWMLVCQILTSLIVGALSSAFTTVVI
ENVSLYGKKIGALNGSFEINLAIVRNAKIDNGTIYTTPTELLTALTQKEV
DGVLMDAYTASSMRNAIDLSGAHPVKLVEYPRYYGVVLSGHLKYIAHSME
ASIHFHEKDIVEMIAGQTDKMKPPNKFETYTLFDTNSPTLMDAVKTLLWM
LFTAVVLGFIFSAYRFHKKRTQVKDVDNTIDTSQSIRPIWREVIKLHYVF
CHRVYNLQTRMDQERIKLYRDKGASSLRNNNRFHLYSKHKYYSSVEKKAD
TKIAQTFRKLSRMPLNNTLSELNNKTKHDFERGDYSHSDNNNDETEKTFR
KISISKRKRRGKESIAGFSRLHDLEEEQEITQSDFSMRSPSLASMRSYNE
RIKDLDSDLDLYNQGYDESDIESDLSGNRDSSDEGENRETDSDSSDGN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_034774XLOC_034774Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00055217TCONS_00055217Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003961FN3_dom
IPR013783Ig-like_fold
IPR013099K_chnl_dom
IPR001638Solute-binding_3/MltF_N
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003961Fibronectin type IIISMARTSM00060FN3_2coord: 71..151
e-value: 0.01
score: 25.0
coord: 168..257
e-value: 0.0051
score: 26.0
IPR003961Fibronectin type IIIPFAMPF00041fn3coord: 171..259
e-value: 4.5E-7
score: 30.0
coord: 77..152
e-value: 5.1E-7
score: 29.9
IPR003961Fibronectin type IIIPROSITEPS50853FN3coord: 74..164
score: 12.813
IPR003961Fibronectin type IIIPROSITEPS50853FN3coord: 1..67
score: 10.612
IPR003961Fibronectin type IIIPROSITEPS50853FN3coord: 170..271
score: 11.14
IPR003961Fibronectin type IIICDDcd00063FN3coord: 1..63
e-value: 1.72562E-4
score: 39.7871
IPR003961Fibronectin type IIICDDcd00063FN3coord: 180..260
e-value: 1.538E-4
score: 39.7871
IPR003961Fibronectin type IIICDDcd00063FN3coord: 77..152
e-value: 5.89218E-8
score: 50.5727
IPR003961Fibronectin type IIISUPERFAMILY49265Fibronectin type IIIcoord: 2..160
IPR003961Fibronectin type IIISUPERFAMILY49265Fibronectin type IIIcoord: 165..258
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 70..161
e-value: 9.0E-12
score: 44.7
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 167..268
e-value: 1.4E-7
score: 31.2
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 1..69
e-value: 3.4E-6
score: 26.8
IPR013099Potassium channel domainPFAMPF07885Ion_trans_2coord: 442..495
e-value: 4.4E-9
score: 36.1
NoneNo IPR availableGENE3D3.40.190.10coord: 502..580
e-value: 1.2E-4
score: 21.7
NoneNo IPR availableGENE3D1.10.287.70coord: 384..497
e-value: 2.6E-16
score: 59.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 768..798
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 861..898
NoneNo IPR availableSUPERFAMILY81324Voltage-gated potassium channelscoord: 398..496
NoneNo IPR availableSUPERFAMILY53850Periplasmic binding protein-like IIcoord: 504..589
IPR001638Solute-binding protein family 3/N-terminal domain of MltFPFAMPF00497SBP_bac_3coord: 500..591
e-value: 8.8E-6
score: 25.2

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00055217-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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