TCONS_00055327-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00055327-protein
Unique NameTCONS_00055327-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length733

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00055327-protein ID=TCONS_00055327-protein|Name=TCONS_00055327-protein|organism=Clytia hemisphaerica|type=polypeptide|length=733bp
MADNTHMTKEVSNLFDELFSEDYESLKNVDQVFIDYQKQETSLKTAIEES
EVKTEGDLNNLSETCTSTLQELESISEQITSLLTQYQTHIDTVTKPKDEL
ESKVIQNEQLEQEICYKLWVDKIQSQSSAVKKSINSSDIKNAVDQHYILY
QICAALQSSACGNLRNFSYDVCEKLYQELRASIESKLSVLLTTMKFPFAN
GVSAPVFNQKEETEEQFKNLLTIAVKLQSLSIDSKYSLVTLLLTDPFKKR
FHFHFYGDRHTNNVEKPEWFLTQILNWKRDHMQFIEGYINPLLKECTKDE
EFSLKDEFLEILLDLCEEKLRKTLKQCLDDDVLLAHLIDETMVFDKELQL
LTPGQPEMNCIKVLLEEENLKHWIDLEKKLAMEVITDLIEKPNNWQPKFS
DVVVIEKKLSFYVPKCVEEFVTMVSMMMNRYENISERSSQKLFMVVLNDT
INSFVLEMKQKASVEHIRPESQAYCSIMNGAFYLHHILTEWSSDIRFLSI
LIDGDTKDSNESDNEAEEEEDIARPFDTEIQTLEKFLDELIDWLIKYMTD
GLKNKLKPYKAESWHSLPRIKDYVIPTLSSGACSLMLFIKEHLHSLEEKC
YHDVFDKIWREFCYSIDELLFTEIVCECHFNEGGASQLQFDIKKNLYVLF
GQYTLRVENYFKRLRESCILLNLLAGSALLIKERLKVSTAENSDEIQDIL
EEHDIHVLSFEHVNRIIHSRVDWPKQQLNYKIK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_034857XLOC_034857Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00055327TCONS_00055327Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007528RINT1_Tip20
Vocabulary: Biological Process
TermDefinition
GO:0048193Golgi vesicle transport
Vocabulary: Cellular Component
TermDefinition
GO:0005783endoplasmic reticulum
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0048193 Golgi vesicle transport
cellular_component GO:0005783 endoplasmic reticulum
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
ZOOM
x 1
POSITION
0
100200300400500600700Expect = 2.6E-84 / Score = 283.8Score = 69.874SequenceCoilPF04437PS51386
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 58..78
IPR007528RINT-1/Tip20PFAMPF04437RINT1_TIP1coord: 242..719
e-value: 2.6E-84
score: 283.8
IPR007528RINT-1/Tip20PROSITEPS51386RINT1_TIP20coord: 155..733
score: 69.874

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00055327-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
ZOOM
x 1
POSITION
0
MADNTHMTKEVSNLFDELFSEDYESLKNVDQVFIDYQKQETSLKTAIEESEVKTEGDLNNLSETCTSTLQELESISEQITSLLTQYQTHIDTVTKPKDELESKVIQNEQLEQEICYKLWVDKIQSQSSAVKKSINSSDIKNAVDQHYILYQICAALQSSACGNLRNFSYDVCEKLYQELRASIESKLSVLLTTMKFPFANGVSAPVFNQKEETEEQFKNLLTIAVKLQSLSIDSKYSLVTLLLTDPFKKRFHFHFYGDRHTNNVEKPEWFLTQILNWKRDHMQFIEGYINPLLKECTKDEEFSLKDEFLEILLDLCEEKLRKTLKQCLDDDVLLAHLIDETMVFDKELQLLTPGQPEMNCIKVLLEEENLKHWIDLEKKLAMEVITDLIEKPNNWQPKFSDVVVIEKKLSFYVPKCVEEFVTMVSMMMNRYENISERSSQKLFMVVLNDTINSFVLEMKQKASVEHIRPESQAYCSIMNGAFYLHHILTEWSSDIRFLSILIDGDTKDSNESDNEAEEEEDIARPFDTEIQTLEKFLDELIDWLIKYMTDGLKNKLKPYKAESWHSLPRIKDYVIPTLSSGACSLMLFIKEHLHSLEEKCYHDVFDKIWREFCYSIDELLFTEIVCECHFNEGGASQLQFDIKKNLYVLFGQYTLRVENYFKRLRESCILLNLLAGSALLIKERLKVSTAENSDEIQDILEEHDIHVLSFEHVNRIIHSRVDWPKQQLNYKIK100200300400500600700Expect = 4.58e-89 / Id = 28.92SequenceRINT1
Match NameE-valueIdentityDescription
RINT14.576e-8928.92RAD50-interacting protein 1 OS=Homo sapiens GN=RIN... [more]
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