TCONS_00055332-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00055332-protein
Unique NameTCONS_00055332-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length162

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00055332-protein ID=TCONS_00055332-protein|Name=TCONS_00055332-protein|organism=Clytia hemisphaerica|type=polypeptide|length=162bp
AVSMALEVPQAAEGPHIAKDVDCPSYLCNGKPDGNFEYRPYSGYVKNQFV
QCVDGKPSCQVCWPKNLEFSEKCNQCLYSAHDECVSTVAFSPAVTSFCPD
KCPHRGPKFSGNIADSDNNKHYIACWEGVTVGCVDCPKGLLFNEQWNACL
YNGVHITKPGSH
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_034860XLOC_034860Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00055332TCONS_00055332Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002557Chitin-bd_dom
Vocabulary: Cellular Component
TermDefinition
GO:0005576extracellular region
Vocabulary: Biological Process
TermDefinition
GO:0006030chitin metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0008061chitin binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006030 chitin metabolic process
cellular_component GO:0005576 extracellular region
molecular_function GO:0008061 chitin binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
ZOOM
x 1
POSITION
0
AVSMALEVPQAAEGPHIAKDVDCPSYLCNGKPDGNFEYRPYSGYVKNQFVQCVDGKPSCQVCWPKNLEFSEKCNQCLYSAHDECVSTVAFSPAVTSFCPDKCPHRGPKFSGNIADSDNNKHYIACWEGVTVGCVDCPKGLLFNEQWNACLYNGVHITKPGSH20406080100120140160Expect = 16.0 / Score = 5.7Expect = 0.28 / Score = 20.2Expect = 1.4E-5 / Score = 25.1Expect = 0.021 / Score = 14.2Expect = 9.2E-6 / Score = 25.0Score = 7.837Score = 6.708Score = SequenceSM00494PF01607G3DSA:2.170.140.10PS50940PS50940SSF57625
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002557Chitin binding domainSMARTSM00494chi_10coord: 26..86
e-value: 16.0
score: 5.7
coord: 100..154
e-value: 0.28
score: 20.2
IPR002557Chitin binding domainPFAMPF01607CBM_14coord: 109..152
e-value: 1.4E-5
score: 25.1
IPR002557Chitin binding domainGENE3D2.170.140.10coord: 95..154
e-value: 9.2E-6
score: 25.0
coord: 17..94
e-value: 0.021
score: 14.2
IPR002557Chitin binding domainPROSITEPS50940CHIT_BIND_IIcoord: 99..149
score: 7.837
IPR002557Chitin binding domainPROSITEPS50940CHIT_BIND_IIcoord: 25..86
score: 6.708
IPR002557Chitin binding domainSUPERFAMILY57625Invertebrate chitin-binding proteinscoord: 102..151

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00055332-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
ZOOM
x 1
POSITION
0
AVSMALEVPQAAEGPHIAKDVDCPSYLCNGKPDGNFEYRPYSGYVKNQFVQCVDGKPSCQVCWPKNLEFSEKCNQCLYSAHDECVSTVAFSPAVTSFCPDKCPHRGPKFSGNIADSDNNKHYIACWEGVTVGCVDCPKGLLFNEQWNACLYNGVHITKPGSH20406080100120140160Sequence
Match NameE-valueIdentityDescription
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