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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00055545-protein ID=TCONS_00055545-protein|Name=TCONS_00055545-protein|organism=Clytia hemisphaerica|type=polypeptide|length=2961bp
MNMAATVNGMAFFHPESFVPRSFSLNMTTHLFGFSVNAFEVNARMEGLER
LIGKYMNNDGYFSSNYLKKVFQIPTRQRRSTETDDYKTIDEQVNMKQSSP
QALVSFNMFGNEIQALTLDDLPFLNGKMDNVNIIHDLYEMTKGKRKVLKH
NMLVMEISHMVPTMLGMPMKIALNGSAVITVDMNGKVDTKNLIFGPKAVT
ISGNLKPSVSLHASGKLSVECYGVSEIGTSFLGNVHFGKNFQGKVHYEEG
KEIISELKADDQITDLLNISYNIFHESSLKKEQVRGIEKRAKGYLCSNNI
FDTTSFMGCDICIQASFPNAFYNGTAPYFPLTGPFSVGVRNYPKDPKLTK
YVLHIKKEDRIYTVSIGTPGATLERKYSLSVGLTRNNEGGLVGFTIGENR
RGVLFDYVYDEETNEVRSTLSSNFTKPPIKLYTEFINRTDPTTLNRHVGT
RWRFTHDKVHIQHDLFYKNTYEYWALGSKLEYAKGQTASIDLKIQYEPQV
FDLVISHPSTDTKLLAKGKPMLPKLEGELNVTHAGQSMFDVYGMVDISKY
EFVGTVTSKPEEAQINAKAKXISKYEFVGTVTSKPEEAQINAKAKLDPAG
KRFKLVSNFNGIPLNVESKLTSADSIHTLTNDMVVGEDKPRLVFNWDRNS
LNTSFDIPGKVDSYWRNTFYREGAIIAITSLLSTKKGEESIIKYTFENTS
DFSEACSRFEVPSGSFGNCLNVYTSKAKQGFAYKQLSPKAKQWATPFSFI
RTDNANGVTNIKGNFMDYINVFYRRDKRELSMNLKAPYVTMSTHMNGGNS
LNATLSFSNGTSSNTLGFNYDLDDQPDEKTQSFQLSMNLVGRMLMRSSFN
PKQSYGDSFLNTVKIMDPSDKPKYTLILKQKNSAGAPKGIENQDYTIVEF
NGPSLHSFKTNMKNKMTIQGSNRRESNNDIVGTIRMAMFDPWSNTIAPLE
DTLSLVMKPNGKMSLKLHNSNTMKQYSGAGKQMAMQYIGMMAQKAFGNVL
GFDNTMVQKLARVMKTAMISYFSTTECNGDQVYERFIKGEFEKQDLMELL
SALVKFPTSDTFKKILKDNKMIIDETMLTAFKKNQDKKVLDIVGGVINDI
QTSPEMNTKNLKQFVQVLGNDKSFNIFEKELFSFLQQLFNEINKIMNSKT
EVDFNNLDLSFVTKHIPVKSGDQVKNTLKSVFEVLKTWKYNVEKTPQENL
LRLMDEFEKIKAFDLLQLDFVNILAKSIIERSRLPKTIEDILKQFLKTLD
HAELARKVSKFTLQSFKVPAPHKSYIDQLLNAKNIDEYLHTLANTIYQKG
RISDQQKTTLKKFLDTRDKAIMVTNIKEMLRSKYKVSETGLDLLETLITD
GNLNSFKDLPSLYSVNFFPKLAQKLLEKMKNLDLSAFLGKLNLLIKDQDV
KNALQAVIDNKHNLNEIPANLLKLVLKKGGGDSPLDQKILKEVNDISVRF
LSIALGNERSPGKVLKNLIINYYGQVYSTAEKALPKSLKPVLKKMNSEII
PVLQQIDTKNLEDDATTTLFDLVDTLSKAIAQFVDTNFEKFMKEDFVNGI
KELMQRIHTEDGKMTLWDIQMKYFKKIDEQFSFLIRLLGQFSNSEKNYFA
EQFTSKEGKILYYKIYQSIWKGKVANKQNLKQLDALFKGLEQNALMQLSE
LTGNYSMFVSINKLAEFIKGLDEGEEITSILENIKEQPDLLFSNYTRAVI
SIINKEHRPGSIINQVLHFTKGLLFGENFMSAIIALNNGQSNALAFDAIH
QQLKELLITIGHIKIRDEVTINQQLDKYLPVMRQRLDGMFKHYQQGTEMY
LGYLTKAKKTIQHGFDVAEKSLRDATEKEDSFDSMLLDFLVPSLDAINPL
LRRYIPKQNNSEEVRAQIKAMCSINFISPPFQCIFAEFIDSMNNAKKDQT
FVDRLLEESENVVIEVVDKLVNDKTNEMQQLKVFIDDIRDFASTKQDNLL
QKMVFRSSKSLEQFLRKTPEYEQLYYALITRGINITDSKGIFNMFVAGPL
NKMTFSTSTKKLENAARVYLPMAVRETSQMLQNASTQVLYGIDEVKISLA
KNEFVTDPIGFILSFPEKVLLDISQNNLKEKKALMAVFKKFETNVKELHQ
KVLKEVGPYSGKLNKVSEKLLQLYREELSKLLDPVLKTLDFVDVKMEKDL
ADYMITSTGKQPFKSRLITLTKKTRELRTKYVQIQKKYLSELKNKIREVL
KNDKAFEPFKSDKILKTVFASIDRKILSKVLKTLNQDIEGILSNAVYPQL
QILAASLDKTVCTIKKNISHYYTNDVKGQTLTWGMPGMYQRYEQMMRQYN
QMSTRVKSLIPKEINQNNIPTLQMMESLTIQYIESYPRQYISRIRNSANN
HHSQLVKSKSMFGQIAGISPDQVFNQMMTKYQEELTRLSTLANKALQFTP
PDDLETPVFRFLGLKTVKSKDNIFQPISRTAYLFEKSLVTFDGKAIYLPK
ELLGRYKDCKYLLTRDFQWKNFTVYLHEAKFVVEMKDGRVEIDRMNGNKV
EVFVKQPSIYSTEKRHEEFPIQLAFSSVLKVQPNVLMIDSLVGLQVYCRL
DVFACNVTVSGYYHNKTLGLFGTNNVENSDDLRMPRGGIASGIIEFINAY
ELRRHKRCAIMDISAVLPAAEDTKGKCSLFRSENRNGNDLSITRKLADFS
TRRSAFGDVCKNEPNNPLVHQAFTDSIHKEFGLLNDMLLSPTFDTCSLNI
RNIRYTSTKDHKRTQIVILLKLIPSMKKVKSHLKRIVRKIQSDLKETDIQ
FSIVGYGGKGVRFHPHLQTGKGQVFTDVDGALTAINLIPFTGEEVSDRLG
LRALKYASQIDYQPGSKIFLLFDNDATFTNSLREMIDVSGQLLSRGIILN
TVNAYDMRRDIIGKDSYGRRYYVREPLGRDSPRTRFPKQDDYIPLVKQSR
GAVFTLKAFLNGNSKWSKALPLSVSKVISLQSKTDQHQCKECACDKCKDV
NNQQCEMKFMQ Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005319 | lipid transporter activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006869 | lipid transport |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0006869 |
lipid transport |
| molecular_function |
GO:0005319 |
lipid transporter activity |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR015255 | Vitellinogen, open beta-sheet | SMART | SM01169 | DUF1943_3 | coord: 1..276
e-value: 5.2E-32
score: 122.3 |
| IPR015255 | Vitellinogen, open beta-sheet | PFAM | PF09172 | DUF1943 | coord: 1..258
e-value: 4.6E-48
score: 163.9 |
| IPR001846 | von Willebrand factor, type D domain | PFAM | PF00094 | VWD | coord: 2437..2587
e-value: 2.0E-8
score: 34.6 |
| IPR001846 | von Willebrand factor, type D domain | PROSITE | PS51233 | VWFD | coord: 2429..2646
score: 17.011 |
| IPR009454 | Lipid transport, open beta-sheet | PFAM | PF06448 | DUF1081 | coord: 301..408
e-value: 3.5E-7
score: 30.5 |
| IPR015817 | Vitellinogen, open beta-sheet, subdomain 1 | GENE3D | 2.20.50.20 | | coord: 1..119
e-value: 3.4E-22
score: 78.4 |
| None | No IPR available | GENE3D | 2.20.80.10 | | coord: 136..357
e-value: 5.5E-27
score: 94.2 |
| IPR015819 | Lipid transport protein, beta-sheet shell | SUPERFAMILY | 56968 | Lipovitellin-phosvitin complex; beta-sheet shell regions | coord: 2..354 |
| IPR002843 | ATPase, V0 complex, c/d subunit | SUPERFAMILY | 103486 | V-type ATP synthase subunit C | coord: 1274..1376 |
Blast
The following BLAST results are available for this feature:
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