TCONS_00055681-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00055681-protein
Unique Name	TCONS_00055681-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	113

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00055681-protein ID=TCONS_00055681-protein|Name=TCONS_00055681-protein|organism=Clytia hemisphaerica|type=polypeptide|length=113bp
FKCEECGKLFTQKKNLKEHFKTHTGEKPFKCEECGIHFRQKGSLAIHLKI
HAGENNFKCEECGKIFTQKGSLKRHLRTHTGEKQFECQECGKCFMQKGTL
KRHLRTHTGERQI

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_035036	XLOC_035036	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00055681	TCONS_00055681	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR013087	Znf_C2H2_type
IPR013083	Znf_RING/FYVE/PHD

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013087	Zinc finger C2H2-type	SMART	SM00355	c2h2final6	coord: 29..51 e-value: 5.7E-4 score: 29.2 coord: 1..23 e-value: 3.1E-4 score: 30.1 coord: 57..79 e-value: 1.0E-5 score: 35.0 coord: 85..107 e-value: 4.0E-4 score: 29.7
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 3..23
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 59..79
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 31..51
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 87..107
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 57..84 score: 17.267
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 29..56 score: 13.63
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 1..28 score: 17.683
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 85..112 score: 16.747
IPR013087	Zinc finger C2H2-type	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 38..94
IPR013087	Zinc finger C2H2-type	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 1..51
None	No IPR available	GENE3D	2.40.155.10		coord: 77..112 e-value: 6.4E-23 score: 81.6
None	No IPR available	GENE3D	2.20.25.10		coord: 54..64 e-value: 1.4E-5 score: 24.5 coord: 22..33 e-value: 2.6E-6 score: 26.9
None	No IPR available	PFAM	PF00096	zf-C2H2	coord: 1..23 e-value: 3.1E-5 score: 24.1 coord: 57..79 e-value: 1.1E-7 score: 31.8 coord: 85..107 e-value: 5.1E-6 score: 26.5 coord: 29..51 e-value: 6.0E-5 score: 23.2
None	No IPR available	GENE3D	3.30.160.60		coord: 1..21 e-value: 2.0E-13 score: 49.7
None	No IPR available	GENE3D	3.30.160.60		coord: 65..76 e-value: 3.7E-12 score: 45.7
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10		coord: 34..53 e-value: 4.9E-19 score: 67.6

Blast

[Close]

BLAST of TCONS_00055681-protein vs. Swiss-Prot (Human)
Match: ZN567 (Zinc finger protein 567 OS=Homo sapiens GN=ZNF567 PE=1 SV=3)

HSP 1 Score: 134.42 bits (337), Expect = 4.873e-38
Identity = 63/111 (56.76%), Postives = 80/111 (72.07%), Query Frame = 0

Query:    1 FKCEECGKLFTQKKNLKEHFKTHTGEKPFKCEECGIHFRQKGSLAIHLKIHAGENNFKCEECGKIFTQKGSLKRHLRTHTGEKQFECQECGKCFMQKGTLKRHLRTHTGER 111
            ++C ECGK F+QK NL  H + HTGEKP+ C ECG  FRQK +L +H KIH G+ +++C +CGK F++K  L  H RTHTGEK ++C ECGKCF QK  L  H RTHTGE+
Sbjct:  505 YECNECGKSFSQKTNLNLHQRIHTGEKPYVCNECGKSFRQKATLTVHQKIHTGQKSYECPQCGKAFSRKSYLIHHQRTHTGEKPYKCSECGKCFRQKTNLIVHQRTHTGEK 615

HSP 2 Score: 122.094 bits (305), Expect = 1.252e-33
Identity = 63/111 (56.76%), Postives = 73/111 (65.77%), Query Frame = 0

Query:    1 FKCEECGKLFTQKKNLKEHFKTHTGEKPFKCEECGIHFRQKGSLAIHLKIHAGENNFKCEECGKIFTQKGSLKRHLRTHTGEKQFECQECGKCFMQKGTLKRHLRTHTGER 111
            + C+ECGK F QK NL  H +THTGEKP+ C ECG  F QK +LA+H K H  E  + C ECGK F QK +L  H RTHTGEK +EC  CGK F  K  L  H RTHTGE+
Sbjct:  393 YICKECGKSFHQKANLTVHQRTHTGEKPYICNECGKSFSQKTTLALHEKTHNEEKPYICSECGKSFRQKTTLVAHQRTHTGEKSYECPHCGKAFRMKSYLIDHHRTHTGEK 503

HSP 3 Score: 120.553 bits (301), Expect = 4.332e-33
Identity = 57/111 (51.35%), Postives = 74/111 (66.67%), Query Frame = 0

Query:    1 FKCEECGKLFTQKKNLKEHFKTHTGEKPFKCEECGIHFRQKGSLAIHLKIHAGENNFKCEECGKIFTQKGSLKRHLRTHTGEKQFECQECGKCFMQKGTLKRHLRTHTGER 111
            ++C  CGK F  K  L +H +THTGEKP++C ECG  F QK +L +H +IH GE  + C ECGK F QK +L  H + HTG+K +EC +CGK F +K  L  H RTHTGE+
Sbjct:  477 YECPHCGKAFRMKSYLIDHHRTHTGEKPYECNECGKSFSQKTNLNLHQRIHTGEKPYVCNECGKSFRQKATLTVHQKIHTGQKSYECPQCGKAFSRKSYLIHHQRTHTGEK 587

HSP 4 Score: 119.783 bits (299), Expect = 8.975e-33
Identity = 60/111 (54.05%), Postives = 70/111 (63.06%), Query Frame = 0

Query:    1 FKCEECGKLFTQKKNLKEHFKTHTGEKPFKCEECGIHFRQKGSLAIHLKIHAGENNFKCEECGKIFTQKGSLKRHLRTHTGEKQFECQECGKCFMQKGTLKRHLRTHTGER 111
            + C ECGK F+QK  L  H KTH  EKP+ C ECG  FRQK +L  H + H GE +++C  CGK F  K  L  H RTHTGEK +EC ECGK F QK  L  H R HTGE+
Sbjct:  421 YICNECGKSFSQKTTLALHEKTHNEEKPYICSECGKSFRQKTTLVAHQRTHTGEKSYECPHCGKAFRMKSYLIDHHRTHTGEKPYECNECGKSFSQKTNLNLHQRIHTGEK 531

HSP 5 Score: 118.242 bits (295), Expect = 2.596e-32
Identity = 58/111 (52.25%), Postives = 73/111 (65.77%), Query Frame = 0

Query:    1 FKCEECGKLFTQKKNLKEHFKTHTGEKPFKCEECGIHFRQKGSLAIHLKIHAGENNFKCEECGKIFTQKGSLKRHLRTHTGEKQFECQECGKCFMQKGTLKRHLRTHTGER 111
            ++C +CGK F QK  L  H + HTGEKP+ C+ECG  F QK +L +H + H GE  + C ECGK F+QK +L  H +TH  EK + C ECGK F QK TL  H RTHTGE+
Sbjct:  365 YECNDCGKSFRQKTTLSLHQRIHTGEKPYICKECGKSFHQKANLTVHQRTHTGEKPYICNECGKSFSQKTTLALHEKTHNEEKPYICSECGKSFRQKTTLVAHQRTHTGEK 475

HSP 6 Score: 115.931 bits (289), Expect = 1.888e-31
Identity = 57/111 (51.35%), Postives = 72/111 (64.86%), Query Frame = 0

Query:    1 FKCEECGKLFTQKKNLKEHFKTHTGEKPFKCEECGIHFRQKGSLAIHLKIHAGENNFKCEECGKIFTQKGSLKRHLRTHTGEKQFECQECGKCFMQKGTLKRHLRTHTGER 111
            ++C +CG  F +K  L +H +THTGEKPF C ECG  FR K +L  H + H GE +++C +C   F  K  L RH RTHTGEK +EC +CGK F QK TL  H R HTGE+
Sbjct:  281 YQCHQCGNAFRRKSYLIDHQRTHTGEKPFVCNECGKSFRLKTALTDHQRTHTGEKSYECLQCRNAFRLKSHLIRHQRTHTGEKPYECNDCGKSFRQKTTLSLHQRIHTGEK 391

HSP 7 Score: 115.546 bits (288), Expect = 2.366e-31
Identity = 57/111 (51.35%), Postives = 75/111 (67.57%), Query Frame = 0

Query:    1 FKCEECGKLFTQKKNLKEHFKTHTGEKPFKCEECGIHFRQKGSLAIHLKIHAGENNFKCEECGKIFTQKGSLKRHLRTHTGEKQFECQECGKCFMQKGTLKRHLRTHTGER 111
            ++C +C   F  K +L  H +THTGEKP++C +CG  FRQK +L++H +IH GE  + C+ECGK F QK +L  H RTHTGEK + C ECGK F QK TL  H +TH  E+
Sbjct:  337 YECLQCRNAFRLKSHLIRHQRTHTGEKPYECNDCGKSFRQKTTLSLHQRIHTGEKPYICKECGKSFHQKANLTVHQRTHTGEKPYICNECGKSFSQKTTLALHEKTHNEEK 447

HSP 8 Score: 114.39 bits (285), Expect = 7.378e-31
Identity = 57/111 (51.35%), Postives = 70/111 (63.06%), Query Frame = 0

Query:    1 FKCEECGKLFTQKKNLKEHFKTHTGEKPFKCEECGIHFRQKGSLAIHLKIHAGENNFKCEECGKIFTQKGSLKRHLRTHTGEKQFECQECGKCFMQKGTLKRHLRTHTGER 111
            + C ECGK F QK  L  H +THTGEK ++C  CG  FR K  L  H + H GE  ++C ECGK F+QK +L  H R HTGEK + C ECGK F QK TL  H + HTG++
Sbjct:  449 YICSECGKSFRQKTTLVAHQRTHTGEKSYECPHCGKAFRMKSYLIDHHRTHTGEKPYECNECGKSFSQKTNLNLHQRIHTGEKPYVCNECGKSFRQKATLTVHQKIHTGQK 559

HSP 9 Score: 110.153 bits (274), Expect = 1.902e-29
Identity = 57/111 (51.35%), Postives = 70/111 (63.06%), Query Frame = 0

Query:    1 FKCEECGKLFTQKKNLKEHFKTHTGEKPFKCEECGIHFRQKGSLAIHLKIHAGENNFKCEECGKIFTQKGSLKRHLRTHTGEKQFECQECGKCFMQKGTLKRHLRTHTGER 111
            F C ECGK F  K  L +H +THTGEK ++C +C   FR K  L  H + H GE  ++C +CGK F QK +L  H R HTGEK + C+ECGK F QK  L  H RTHTGE+
Sbjct:  309 FVCNECGKSFRLKTALTDHQRTHTGEKSYECLQCRNAFRLKSHLIRHQRTHTGEKPYECNDCGKSFRQKTTLSLHQRIHTGEKPYICKECGKSFHQKANLTVHQRTHTGEK 419

HSP 10 Score: 103.219 bits (256), Expect = 4.952e-27
Identity = 55/109 (50.46%), Postives = 66/109 (60.55%), Query Frame = 0

Query:    3 CEECGKLFTQKKNLKEHFKTHTGEKPFKCEECGIHFRQKGSLAIHLKIHAGENNFKCEECGKIFTQKGSLKRHLRTHTGEKQFECQECGKCFMQKGTLKRHLRTHTGER 111
            C ECGK F +K  L  H   H+ EKP++C +CG  FR+K  L  H + H GE  F C ECGK F  K +L  H RTHTGEK +EC +C   F  K  L RH RTHTGE+
Sbjct:  255 CNECGKSFCRKSVLILHQGIHSEEKPYQCHQCGNAFRRKSYLIDHQRTHTGEKPFVCNECGKSFRLKTALTDHQRTHTGEKSYECLQCRNAFRLKSHLIRHQRTHTGEK 363

HSP 11 Score: 85.5001 bits (210), Expect = 9.151e-21
Identity = 51/126 (40.48%), Postives = 63/126 (50.00%), Query Frame = 0

Query:    1 FKCEECGKLFTQKKNLKEHFKTHTGEKP---------------FKCEECGIHFRQKGSLAIHLKIHAGENNFKCEECGKIFTQKGSLKRHLRTHTGEKQFECQECGKCFMQKGTLKRHLRTHTGER 111
            F   +C K F Q+  L  H + + GE P                 C ECG  F +K  L +H  IH+ E  ++C +CG  F +K  L  H RTHTGEK F C ECGK F  K  L  H RTHTGE+
Sbjct:  210 FGYNDCEKSFLQRGGLITHSRPYKGENPSVYNKKRRATNIEKKHTCNECGKSFCRKSVLILHQGIHSEEKPYQCHQCGNAFRRKSYLIDHQRTHTGEKPFVCNECGKSFRLKTALTDHQRTHTGEK 335

The following BLAST results are available for this feature:

BLAST of TCONS_00055681-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00055681-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
ZN567	4.873e-38	56.76	Zinc finger protein 567 OS=Homo sapiens GN=ZNF567 ...	[more]

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TCONS_00055681-protein (polypeptide) - C. hemisphaerica