TCONS_00055683-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00055683-protein
Unique NameTCONS_00055683-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length370

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00055683-protein ID=TCONS_00055683-protein|Name=TCONS_00055683-protein|organism=Clytia hemisphaerica|type=polypeptide|length=370bp
MDLVSIKIEPDDENQHVGKEEHSFTGRSVKDSYLEITIEEEDNSLTPNEE
VPYLLLQSDSFDINDKTGETVDSKGFSSESSVPCDDSQQADRNQDSSNVA
SLVIEKKETPGKKKSVNNHKCEICNKTFTKRFSLKRHLVLHTGEKPFKCE
ECGKCFPFQHELTQHSIKHSGIKPFKCEECDESFQSYYFLKNHLIKVHNG
GLPFNCKECCKSFPCQSALTRHLMVHSDIRPCKCEECGKCFRSKQNLKDH
LRIHTGEKPFKCEECGKSFRQRSKLTRHLNVHSEIKPYKCQECGKCFAEQ
RSLTHHTEALCGVMPLKCEECGRRFKYVESLSKHQKTHEAKPCQREKVDL
EKLFAWKQNFNDHQDNKQSS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_035038XLOC_035038Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00055683TCONS_00055683Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 119..141
e-value: 0.0013
score: 28.0
coord: 204..226
e-value: 0.068
score: 22.3
coord: 175..198
e-value: 0.0056
score: 25.9
coord: 260..282
e-value: 8.8E-5
score: 31.9
coord: 232..254
e-value: 0.0022
score: 27.2
coord: 147..169
e-value: 0.12
score: 21.5
coord: 316..338
e-value: 0.0021
score: 27.3
coord: 288..308
e-value: 27.0
score: 9.4
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 318..338
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 206..226
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 232..254
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 149..169
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 262..282
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 177..198
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 121..141
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 316..343
score: 12.133
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 175..203
score: 11.843
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 147..174
score: 14.046
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 232..259
score: 16.768
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 260..287
score: 16.061
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 204..231
score: 13.339
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 119..146
score: 15.521
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 288..315
score: 11.468
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 141..193
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 286..338
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 198..250
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 117..150
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 241..297
NoneNo IPR availableGENE3D2.20.28.30coord: 299..326
e-value: 7.4E-14
score: 51.3
coord: 327..368
e-value: 2.6E-7
score: 30.4
NoneNo IPR availableGENE3D3.30.160.60coord: 66..130
e-value: 1.7E-7
score: 30.7
coord: 168..187
e-value: 5.4E-8
score: 32.3
NoneNo IPR availablePFAMPF13912zf-C2H2_6coord: 204..223
e-value: 0.035
score: 14.0
NoneNo IPR availableGENE3D2.20.28.30coord: 131..152
e-value: 4.8E-13
score: 48.6
NoneNo IPR availableGENE3D3.30.160.60coord: 188..213
e-value: 3.4E-14
score: 52.4
NoneNo IPR availableGENE3D3.30.160.60coord: 274..298
e-value: 1.9E-17
score: 62.9
coord: 242..259
e-value: 4.1E-16
score: 58.6
NoneNo IPR availablePFAMPF00096zf-C2H2coord: 317..338
e-value: 2.7E-4
score: 21.1
coord: 260..282
e-value: 1.5E-6
score: 28.2
coord: 147..169
e-value: 0.0014
score: 18.9
coord: 119..141
e-value: 8.4E-4
score: 19.6
coord: 233..254
e-value: 1.2E-4
score: 22.3
coord: 288..307
e-value: 0.005
score: 17.1
NoneNo IPR availableGENE3D3.30.160.60coord: 153..167
e-value: 2.2E-8
score: 33.5
NoneNo IPR availableGENE3D3.30.160.60coord: 260..273
e-value: 3.6E-15
score: 55.4
NoneNo IPR availableGENE3D3.30.160.60coord: 214..241
e-value: 9.5E-17
score: 60.4
NoneNo IPR availablePFAMPF13894zf-C2H2_4coord: 175..198
e-value: 9.2E-4
score: 19.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..26
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 67..98

Blast
BLAST of TCONS_00055683-protein vs. Swiss-Prot (Human)
Match: ZN273 (Zinc finger protein 273 OS=Homo sapiens GN=ZNF273 PE=1 SV=3)

HSP 1 Score: 217.624 bits (553), Expect = 1.378e-65
Identity = 110/250 (44.00%), Postives = 152/250 (60.80%), Query Frame = 0
Query:  116 VNNHKCEICNKTFTKRFSLKRHLVLHTGEKPFKCEECGKCFPFQHELTQHSIKHSGIKPFKCEECDESFQSYYFLKNHLIKVHNGGLPFNCKECCKSFPCQSALTRHLMVHSDIRPCKCEECGKCFRSKQNLKDHLRIHTGEKPFKCEECGKSFRQRSKLTRHLNVHSEIKPYKCQECGKCFAEQRSLTHHTEALCGVMPLKCEECGRRFKYVESLSKHQKTHEA-KPCQREKVDLEKLFAWKQNFNDHQ 364
            VN +KCE C K F +  +L +H  +HT EKP+KCE+CGK F     LT+H I H+G KP+ CEEC + F  +  L  H I +H G  P+ C EC K+F   S LT+H  +H+  +P KCEECGK F     L  H  +HTGEKP+KCEECGK+F++ + LT+H  ++++ KPYKC+ECGK F+   +LT H     G  P KCEECG  F+   +L++H++ H   KP +    +  K F W      H+
Sbjct:  259 VNPYKCEECGKAFNQSLTLTKHKKIHTEEKPYKCEDCGKVFSVFSVLTKHKIIHTGTKPYNCEECGKGFSIFSTLTKHKI-IHTGEKPYKCNECGKAFNWSSTLTKHKRIHTGEKPYKCEECGKAFNQSSTLTRHKIVHTGEKPYKCEECGKAFKRSTTLTKHKRIYTKEKPYKCEECGKAFSVFSTLTKHKIIHTGAKPYKCEECGSAFRAFSTLTEHKRVHTGEKPYKCN--ECGKAFNWSSTLTKHK 505          

HSP 2 Score: 210.305 bits (534), Expect = 8.426e-63
Identity = 109/228 (47.81%), Postives = 140/228 (61.40%), Query Frame = 0
Query:  116 VNNHKCEICNKTFTKRFSLKRHLVLHTGEKPFKCEECGKCFPFQHELTQHSIKHSGIKPFKCEECDESFQSYYFLKNHLIKVHNGGLPFNCKECCKSFPCQSALTRHLMVHSDIRPCKCEECGKCFRSKQNLKDHLRIHTGEKPFKCEECGKSFRQRSKLTRHLNVHSEIKPYKCQECGKCFAEQRSLTHHTEALCGVMPLKCEECGRRFKYVESLSKHQKTHE-AKP 342
            VN +KC+ C K F +  +L +H ++H    P+KCEECGK F     LT+H   H+  KP+KCE+C + F  +  L  H I +H G  P+NC+EC K F   S LT+H ++H+  +P KC ECGK F     L  H RIHTGEKP+KCEECGK+F Q S LTRH  VH+  KPYKC+ECGK F    +LT H        P KCEECG+ F    +L+KH+  H  AKP
Sbjct:  231 VNFYKCKTCGKAFNQFSNLTKHKIIHPEVNPYKCEECGKAFNQSLTLTKHKKIHTEEKPYKCEDCGKVFSVFSVLTKHKI-IHTGTKPYNCEECGKGFSIFSTLTKHKIIHTGEKPYKCNECGKAFNWSSTLTKHKRIHTGEKPYKCEECGKAFNQSSTLTRHKIVHTGEKPYKCEECGKAFKRSTTLTKHKRIYTKEKPYKCEECGKAFSVFSTLTKHKIIHTGAKP 457          

HSP 3 Score: 209.534 bits (532), Expect = 1.469e-62
Identity = 113/249 (45.38%), Postives = 149/249 (59.84%), Query Frame = 0
Query:  119 HKCEICNKTFTKRFSLKRHLVLHTGEKPFKCEECGKCFPFQHELTQHSIKHSGIKPFKCEECDESFQSYYFLKNHLIKVHNGGLPFNCKECCKSFPCQSALTRHLMVHSDIRPCKCEECGKCFRSKQNLKDHLRIHTGEKPFKCEECGKSFRQRSKLTRHLNVHSEIKPYKCQECGKCFAEQRSLTHHTEALCGVMPLKCEECGRRFKYVESLSKHQKTHEA-KPCQREKVDLEKLFAWKQNFNDHQDN 366
            + CE C K F+   +L +H ++HTGEKP+KC ECGK F +   LT+H   H+G KP+KCEEC ++F     L  H I VH G  P+ C+EC K+F   + LT+H  +++  +P KCEECGK F     L  H  IHTG KP+KCEECG +FR  S LT H  VH+  KPYKC ECGK F    +LT H     G  P KCEECG+ F    +L++H+K H   KP + ++ D    F    NF+ H+ N
Sbjct:  318 YNCEECGKGFSIFSTLTKHKIIHTGEKPYKCNECGKAFNWSSTLTKHKRIHTGEKPYKCEECGKAFNQSSTLTRHKI-VHTGEKPYKCEECGKAFKRSTTLTKHKRIYTKEKPYKCEECGKAFSVFSTLTKHKIIHTGAKPYKCEECGSAFRAFSTLTEHKRVHTGEKPYKCNECGKAFNWSSTLTKHKRIHTGEKPYKCEECGKAFNRSSNLTRHKKIHTGEKPYKPKRCD--SAFDNTPNFSRHKRN 563          

HSP 4 Score: 209.149 bits (531), Expect = 2.378e-62
Identity = 111/247 (44.94%), Postives = 148/247 (59.92%), Query Frame = 0
Query:  119 HKCEICNKTFTKRFSLKRHLVLHTGEKPFKCEECGKCFPFQHELTQHSIKHSGIKPFKCEECDESFQSYYFLKNHLIKVHNGGLPFNCKECCKSFPCQSALTRHLMVHSDIRPCKCEECGKCFRSKQNLKDHLRIHTGEKPFKCEECGKSFRQRSKLTRHLNVHSEIKPYKCQECGKCFAEQRSLTHHTEALCGVMPLKCEECGRRFKYVESLSKHQKTHEA-KPCQREKVDLEKLFAWKQNFNDHQ 364
            +KCE C K F+    L +H ++HTG KP+ CEECGK F     LT+H I H+G KP+KC EC ++F     L  H  ++H G  P+ C+EC K+F   S LTRH +VH+  +P KCEECGK F+    L  H RI+T EKP+KCEECGK+F   S LT+H  +H+  KPYKC+ECG  F    +LT H     G  P KC ECG+ F +  +L+KH++ H   KP + E  +  K F    N   H+
Sbjct:  290 YKCEDCGKVFSVFSVLTKHKIIHTGTKPYNCEECGKGFSIFSTLTKHKIIHTGEKPYKCNECGKAFNWSSTLTKHK-RIHTGEKPYKCEECGKAFNQSSTLTRHKIVHTGEKPYKCEECGKAFKRSTTLTKHKRIYTKEKPYKCEECGKAFSVFSTLTKHKIIHTGAKPYKCEECGSAFRAFSTLTEHKRVHTGEKPYKCNECGKAFNWSSTLTKHKRIHTGEKPYKCE--ECGKAFNRSSNLTRHK 533          

HSP 5 Score: 199.519 bits (506), Expect = 8.626e-59
Identity = 99/220 (45.00%), Postives = 137/220 (62.27%), Query Frame = 0
Query:  119 HKCEICNKTFTKRFSLKRHLVLHTGEKPFKCEECGKCFPFQHELTQHSIKHSGIKPFKCEECDESFQSYYFLKNHLIKVHNGGLPFNCKECCKSFPCQSALTRHLMVHSDIRPCKCEECGKCFRSKQNLKDHLRIHTGEKPFKCEECGKSFRQRSKLTRHLNVHSEIKPYKCQECGKCFAEQRSLTHHTEALCGVMPLKCEECGRRFKYVESLSKHQKTH 338
            +KC  C K F    +L +H  +HTGEKP+KCEECGK F     LT+H I H+G KP+KCEEC ++F+    L  H  +++    P+ C+EC K+F   S LT+H ++H+  +P KCEECG  FR+   L +H R+HTGEKP+KC ECGK+F   S LT+H  +H+  KPYKC+ECGK F    +LT H +   G  P K + C   F    + S+H++ H
Sbjct:  346 YKCNECGKAFNWSSTLTKHKRIHTGEKPYKCEECGKAFNQSSTLTRHKIVHTGEKPYKCEECGKAFKRSTTLTKHK-RIYTKEKPYKCEECGKAFSVFSTLTKHKIIHTGAKPYKCEECGSAFRAFSTLTEHKRVHTGEKPYKCNECGKAFNWSSTLTKHKRIHTGEKPYKCEECGKAFNRSSNLTRHKKIHTGEKPYKPKRCDSAFDNTPNFSRHKRNH 564          

HSP 6 Score: 139.428 bits (350), Expect = 1.336e-36
Identity = 80/199 (40.20%), Postives = 109/199 (54.77%), Query Frame = 0
Query:  142 TGEKPFKCEECGKCFPFQHELTQHSIKHSGIKPFKCEECDESFQSYYFLKNHLIKVHNGGLPFNCKECCKSFPCQSALTRHLMVHSDIRPCKCEECGKCFRSKQNLKDHLRIHTGEKPFKCEECGKSFRQRSKLTRHLNVHSEIKPYKCQECGKCFAEQRSLTHHTEALCGVMPLKCEECGRRFKYVESLSKHQKTHEA 340
            T  K F+C++  K          H  + +G KPFKC+EC +S      L  H          + CK C K+F   S LT+H ++H ++ P KCEECGK F     L  H +IHT EKP+KCE+CGK F   S LT+H  +H+  KPY C+ECGK F+   +LT H     G  P KC ECG+ F +  +L+KH++ H  
Sbjct:  173 TQSKIFQCDKYVKVLHKFSNSNIHKKRQTGKKPFKCKECGKSCCILSQLTQHKKTATRVNF-YKCKTCGKAFNQFSNLTKHKIIHPEVNPYKCEECGKAFNQSLTLTKHKKIHTEEKPYKCEDCGKVFSVFSVLTKHKIIHTGTKPYNCEECGKGFSIFSTLTKHKIIHTGEKPYKCNECGKAFNWSSTLTKHKRIHTG 370          

HSP 7 Score: 121.324 bits (303), Expect = 2.698e-30
Identity = 74/189 (39.15%), Postives = 97/189 (51.32%), Query Frame = 0
Query:  179 ECDESFQSYYFLKNHLI--KVHNGGLPFNCKECCKSFPCQSALTRHLMVHSDIRPCKCEECGKCFRSKQNLKDHLRIHTGEKPFKCEECGKSFRQRSKLTRHLNVHSEIKPYKCQECGKCFAEQRSLTHHTEALCGVMPLKCEECGRRFKYVESLSKHQKTHEA-KPCQREKVDLEKLFAWKQNFNDHQ 364
            +CD+  +  +   N  I  K   G  PF CKEC KS    S LT+H    + +   KC+ CGK F    NL  H  IH    P+KCEECGK+F Q   LT+H  +H+E KPYKC++CGK F+    LT H     G  P  CEECG+ F    +L+KH+  H   KP +    +  K F W      H+
Sbjct:  179 QCDKYVKVLHKFSNSNIHKKRQTGKKPFKCKECGKSCCILSQLTQHKKTATRVNFYKCKTCGKAFNQFSNLTKHKIIHPEVNPYKCEECGKAFNQSLTLTKHKKIHTEEKPYKCEDCGKVFSVFSVLTKHKIIHTGTKPYNCEECGKGFSIFSTLTKHKIIHTGEKPYKCN--ECGKAFNWSSTLTKHK 365          

HSP 8 Score: 111.309 bits (277), Expect = 9.365e-27
Identity = 59/140 (42.14%), Postives = 81/140 (57.86%), Query Frame = 0
Query:  119 HKCEICNKTFTKRFSLKRHLVLHTGEKPFKCEECGKCFPFQHELTQHSIKHSGIKPFKCEECDESFQSYYFLKNHLIKVHNGGLPFNCKECCKSFPCQSALTRHLMVHSDIRPCKCEECGKCFRSKQNLKDHLRIHTGEK 258
            +KCE C K F+   +L +H ++HTG KP+KCEECG  F     LT+H   H+G KP+KC EC ++F     L  H  ++H G  P+ C+EC K+F   S LTRH  +H+  +P K + C   F +  N   H R H GEK
Sbjct:  430 YKCEECGKAFSVFSTLTKHKIIHTGAKPYKCEECGSAFRAFSTLTEHKRVHTGEKPYKCNECGKAFNWSSTLTKHK-RIHTGEKPYKCEECGKAFNRSSNLTRHKKIHTGEKPYKPKRCDSAFDNTPNFSRHKRNHMGEK 568          
The following BLAST results are available for this feature:
BLAST of TCONS_00055683-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ZN2731.378e-6544.00Zinc finger protein 273 OS=Homo sapiens GN=ZNF273 ... [more]
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