TCONS_00055688-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00055688-protein
Unique NameTCONS_00055688-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length260

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00055688-protein ID=TCONS_00055688-protein|Name=TCONS_00055688-protein|organism=Clytia hemisphaerica|type=polypeptide|length=260bp
DNKKNSDMNKEFKDEQKVDSVSIKIGPDDAFLNLLGEKKHEFVDTNADDD
IPLKIKIEEEINSFAPVEEVSDFQHQPDSFDIKIELDEIIPPTNLTTDAA
NLQVENVETRERKNNLARKWNKRNFICKDCGKAFQFYCNLKNHLRIHTGE
KPFKCQECGKCFTQKSSLNVHVKIHTGEKPFKCKECGKQFSQRGNLIQHS
NIHNGIKSFKCKECGKCFSRKDTLNIHMKTIHQNQNLLDVASLIVENEET
RLNKIDYSKY
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_035043XLOC_035043Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00055688TCONS_00055688Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 99..119
NoneNo IPR availablePFAMPF00096zf-C2H2coord: 181..203
e-value: 6.2E-5
score: 23.1
coord: 125..147
e-value: 6.0E-4
score: 20.0
coord: 153..175
e-value: 3.9E-6
score: 26.9
coord: 209..232
e-value: 8.8E-7
score: 29.0
NoneNo IPR availableGENE3D3.30.160.60coord: 144..165
e-value: 7.0E-23
score: 79.9
NoneNo IPR availableGENE3D2.20.25.10coord: 202..214
e-value: 0.0023
score: 17.4
NoneNo IPR availableGENE3D3.30.160.60coord: 131..143
e-value: 6.5E-11
score: 41.6
NoneNo IPR availableGENE3D2.20.28.10coord: 36..130
e-value: 0.011
score: 15.0
NoneNo IPR availableGENE3D3.30.160.60coord: 166..185
e-value: 4.8E-21
score: 74.4
NoneNo IPR availableGENE3D3.30.160.60coord: 215..254
e-value: 1.4E-9
score: 37.3
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 153..175
e-value: 1.9E-4
score: 30.8
coord: 125..147
e-value: 0.027
score: 23.6
coord: 181..203
e-value: 4.1E-4
score: 29.7
coord: 209..232
e-value: 7.5E-5
score: 32.1
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 155..175
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 183..203
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 127..147
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 211..232
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 125..152
score: 16.623
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 209..237
score: 13.63
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 153..180
score: 17.994
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 181..208
score: 14.627
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 133..190
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 175..227
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 186..201
e-value: 9.9E-16
score: 57.0

Blast
BLAST of TCONS_00055688-protein vs. Swiss-Prot (Human)
Match: ZN829 (Zinc finger protein 829 OS=Homo sapiens GN=ZNF829 PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.200e-37
Identity = 61/119 (51.26%), Postives = 86/119 (72.27%), Query Frame = 0
Query:  121 NKRNFICKDCGKAFQFYCNLKNHLRIHTGEKPFKCQECGKCFTQKSSLNVHVKIHTGEKPFKCKECGKQFSQRGNLIQHSNIHNGIKSFKCKECGKCFSRKDTLNIHMKTIHQNQNLLD 239
             ++ + CK+CGKAF++  NL +H RIHTGEKP++C+ CGK FT+ S L +H++IHTGEKP++CKECGK F+Q   LIQH  +H G K ++CK+CGK F+   TL  H + IH  + L +
Sbjct:  236 GEKPYECKECGKAFKYCSNLNDHQRIHTGEKPYECKVCGKAFTKSSQLFLHLRIHTGEKPYECKECGKAFTQHSRLIQHQRMHTGEKPYECKQCGKAFNSASTLTNHHR-IHAGEKLYE 353          

HSP 2 Score: 112.464 bits (280), Expect = 1.010e-28
Identity = 56/115 (48.70%), Postives = 75/115 (65.22%), Query Frame = 0
Query:  121 NKRNFICKDCGKAFQFYCNLKNHLRIHTGEKPFKCQECGKCFTQKSSLNVHVKIHTGEKPFKCKECGKQFSQRGNLIQHSNIHNGIKSFKCKECGKCFSRKDTLNIHMKTIHQNQ 235
             ++ + CK CGKAF     L  HLRIHTGEKP++C+ECGK FTQ S L  H ++HTGEKP++CK+CGK F+    L  H  IH G K ++C+EC K F +   L  H + IH ++
Sbjct:  264 GEKPYECKVCGKAFTKSSQLFLHLRIHTGEKPYECKECGKAFTQHSRLIQHQRMHTGEKPYECKQCGKAFNSASTLTNHHRIHAGEKLYECEECRKAFIQSSELIQHQR-IHTDE 377          

HSP 3 Score: 110.538 bits (275), Expect = 6.320e-28
Identity = 53/119 (44.54%), Postives = 74/119 (62.18%), Query Frame = 0
Query:  121 NKRNFICKDCGKAFQFYCNLKNHLRIHTGEKPFKCQECGKCFTQKSSLNVHVKIHTGEKPFKCKECGKQFSQRGNLIQHSNIHNGIKSFKCKECGKCFSRKDTLNIHMKTIHQNQNLLD 239
             ++ + CK+CGKAF  +  L  H R+HTGEKP++C++CGK F   S+L  H +IH GEK ++C+EC K F Q   LIQH  IH   K ++C ECGK F++   L  H + IH  +   D
Sbjct:  292 GEKPYECKECGKAFTQHSRLIQHQRMHTGEKPYECKQCGKAFNSASTLTNHHRIHAGEKLYECEECRKAFIQSSELIQHQRIHTDEKPYECNECGKAFNKGSNLTRHQR-IHTGEKPYD 409          

HSP 4 Score: 110.153 bits (274), Expect = 7.203e-28
Identity = 53/107 (49.53%), Postives = 67/107 (62.62%), Query Frame = 0
Query:  121 NKRNFICKDCGKAFQFYCNLKNHLRIHTGEKPFKCQECGKCFTQKSSLNVHVKIHTGEKPFKCKECGKQFSQRGNLIQHSNIHNGIKSFKCKECGKCFSRKDTLNIH 227
             ++ + CK CGKAF     L NH RIH GEK ++C+EC K F Q S L  H +IHT EKP++C ECGK F++  NL +H  IH G K + CKECGK F  +  L  H
Sbjct:  320 GEKPYECKQCGKAFNSASTLTNHHRIHAGEKLYECEECRKAFIQSSELIQHQRIHTDEKPYECNECGKAFNKGSNLTRHQRIHTGEKPYDCKECGKAFGSRSDLIRH 426          

HSP 5 Score: 107.071 bits (266), Expect = 1.018e-26
Identity = 51/116 (43.97%), Postives = 76/116 (65.52%), Query Frame = 0
Query:  120 WNKRNFICKDCGKAFQFYCNLKNHLRIHTGEKPFKCQECGKCFTQKSSLNVHVKIHTGEKPFKCKECGKQFSQRGNLIQHSNIHNGIKSFKCKECGKCFSRKDTLNIHMKTIHQNQ 235
            + ++++  K+ GK+F     +  H RIHTG+KP++C+ECGK F+  S  + H +IHTGEKP++CKECGK F    NL  H  IH G K ++CK CGK F++   L +H++ IH  +
Sbjct:  179 FGEKHYESKEYGKSFSRGSLVTRHQRIHTGKKPYECKECGKAFSCSSYFSQHQRIHTGEKPYECKECGKAFKYCSNLNDHQRIHTGEKPYECKVCGKAFTKSSQLFLHLR-IHTGE 293          

HSP 6 Score: 96.6709 bits (239), Expect = 5.192e-23
Identity = 51/109 (46.79%), Postives = 65/109 (59.63%), Query Frame = 0
Query:  127 CKDCGKAFQFYCNLKNHLRIHTGEKPFKCQECGKCFTQKSSLNVHVKIHTGEKPFKCKECGKQFSQRGNLIQHSNIHNGIKSFKCKECGKCFSRKDTLNIHMKTIHQNQ 235
            CK CGK F        H RIH GEK ++ +E GK F++ S +  H +IHTG+KP++CKECGK FS      QH  IH G K ++CKECGK F     LN H + IH  +
Sbjct:  158 CKICGKTFNQNSQFIQHQRIHFGEKHYESKEYGKSFSRGSLVTRHQRIHTGKKPYECKECGKAFSCSSYFSQHQRIHTGEKPYECKECGKAFKYCSNLNDHQR-IHTGE 265          

HSP 7 Score: 95.5153 bits (236), Expect = 1.592e-22
Identity = 44/81 (54.32%), Postives = 55/81 (67.90%), Query Frame = 0
Query:  125 FICKDCGKAFQFYCNLKNHLRIHTGEKPFKCQECGKCFTQKSSLNVHVKIHTGEKPFKCKECGKQFSQRGNLIQHSNIHNG 205
            + C++C KAF     L  H RIHT EKP++C ECGK F + S+L  H +IHTGEKP+ CKECGK F  R +LI+H  IH G
Sbjct:  352 YECEECRKAFIQSSELIQHQRIHTDEKPYECNECGKAFNKGSNLTRHQRIHTGEKPYDCKECGKAFGSRSDLIRHEGIHTG 432          
The following BLAST results are available for this feature:
BLAST of TCONS_00055688-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ZN8291.200e-3751.26Zinc finger protein 829 OS=Homo sapiens GN=ZNF829 ... [more]
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